Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01442 ATGACTGTTAACATCTTAGCCAGCCCCATACCCTTCTCCCTCTATATAACCACAACCACCATAGCATTCCAAAAGCACCACAACACAGAAAAGAAAAGGCCCCAAACACATAATTACTACACTACCTTTCCATATCTGGGTCTTGCAAGAGTTGAGTGGTTGATCATGGCCACCATGGGAACTAGGGTTTCTTTGTTGTGCATTGTGTGGGTGGTTCTTGGAGCAACAAGCACTCCCAGGGCAGAGGCAGTGGTGACATGTGGGCAAGTTGTGAGCAACCTGACCCCATGCATTTCCTATGTGATGTATGGTGGAACCAATGTTCCTGATCAGTGCTGCAATGGGATCAAGAACCTCTATGGCCTGGCTCAGACCACACCTGACCGCCAAGCTGTTTGCAACTGCATCAAGAATGCTGTTAGTGGCAGTGGCATCAACTACAATCCTAGGAATCTCAACCTTGCTGCTAGTCTTCCCAAGCAATGTCATGTAAACATTCCTTACCAGATCAGCCCTAGCACTGACTGTAACAGTGTGCAGTGA 543 0.477 MTVNILASPIPFSLYITTTTIAFQKHHNTEKKRPQTHNYYTTFPYLGLARVEWLIMATMGTRVSLLCIVWVVLGATSTPRAEAVVTCGQVVSNLTPCISYVMYGGTNVPDQCCNGIKNLYGLAQTTPDRQAVCNCIKNAVSGSGINYNPRNLNLAASLPKQCHVNIPYQISPSTDCNSVQ 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01442 180 PRINTS Plant phospholipid transfer protein signature 86 102 IPR000528 GO:0006869|GO:0008289
Viun10g01442 180 PRINTS Plant phospholipid transfer protein signature 167 178 IPR000528 GO:0006869|GO:0008289
Viun10g01442 180 PRINTS Plant phospholipid transfer protein signature 107 121 IPR000528 GO:0006869|GO:0008289
Viun10g01442 180 PRINTS Plant phospholipid transfer protein signature 128 143 IPR000528 GO:0006869|GO:0008289
Viun10g01442 180 Pfam Protease inhibitor/seed storage/LTP family 87 176 IPR016140 -
Viun10g01442 180 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 65 177 IPR000528 GO:0006869|GO:0008289
Viun10g01442 180 CDD nsLTP1 85 177 - -
Viun10g01442 180 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 85 179 IPR036312 -
Viun10g01442 180 Gene3D - 84 180 IPR036312 -
Viun10g01442 180 ProSitePatterns Plant lipid transfer proteins signature. 158 179 IPR000528 GO:0006869|GO:0008289
Viun10g01442 180 SMART aai_6 87 176 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01442 Viun-Chr10 28797054 28798152 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01442 59 180 Acyl Lipid Metabolism Gene Families AT2G38540 44.355 1.25e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01442 - - vun:114166121 377.096