Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01425 ATGGACGGAAGAATGGGGCTTTTGTTTCTGTTTTTGTTGGGTGCTGCTTGGGTTTGCGATGCAAGAGAACTGACAAACTATGGCGAAGTCAACAGGAAATCAGATGCCTGTGAACTTTGTGAGGAATATACCACAGAGGTCCTTGATTATCTAAATGATAAAGAGAACCAAAGAGAGATTATTGATGCACTTCACGATAAATGTTATCAGATGCTCTCTTTCAAACAGCAGTGCATTGAATTGGTGGATCATTATGCCCCACGTTTCTTCTCAGAAATCGCATCAGTTCTGCCTAAAGAACTCTGCAGACAGGTCCACCTCTGCCAATCTGCAAATATTTCCTCACAAGTTCAAGGAAATACCTGTGACTCTTGCAAAGATACTGTTTCAGCCATACTGGTTAAGTTGAATGATCCTGACACCAAGCTTGAGATAATGGAGGCACTGTTGAAAGCATGCAATTCTATGGATCAATTGTCAAAGAAGTGCAAGAGGATGGTATTTGAATATGGACCTTTGATTATTGTCAAAGCAGAGAAGTACCTGAAAACAACAGATATATGCACTACATTACATGTTTGCCCAGCTTCCACTGCAATTAGCAACAATGAAGCTTCAATCATGGAAGAAGTACCTTTGATTTCTGACTCTTAA 654 0.4021 MDGRMGLLFLFLLGAAWVCDARELTNYGEVNRKSDACELCEEYTTEVLDYLNDKENQREIIDALHDKCYQMLSFKQQCIELVDHYAPRFFSEIASVLPKELCRQVHLCQSANISSQVQGNTCDSCKDTVSAILVKLNDPDTKLEIMEALLKACNSMDQLSKKCKRMVFEYGPLIIVKAEKYLKTTDICTTLHVCPASTAISNNEASIMEEVPLISDS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01425 217 Gene3D - 117 197 - -
Viun10g01425 217 ProSiteProfiles Saposin B type domain profile. 33 112 IPR008139 -
Viun10g01425 217 SUPERFAMILY Saposin 35 110 IPR011001 -
Viun10g01425 217 PRINTS Saposin signature 119 141 IPR008373 GO:0005764|GO:0006665
Viun10g01425 217 PRINTS Saposin signature 37 57 IPR008373 GO:0005764|GO:0006665
Viun10g01425 217 PRINTS Saposin signature 172 195 IPR008373 GO:0005764|GO:0006665
Viun10g01425 217 Pfam Saposin-like type B, region 1 121 156 IPR007856 GO:0006629
Viun10g01425 217 Pfam Saposin-like type B, region 1 35 71 IPR007856 GO:0006629
Viun10g01425 217 ProSiteProfiles Saposin B type domain profile. 118 198 IPR008139 -
Viun10g01425 217 SUPERFAMILY Saposin 119 196 IPR011001 -
Viun10g01425 217 FunFam Pulmonary surfactant-associated protein B 118 196 - -
Viun10g01425 217 Pfam Saposin-like type B, region 2 76 108 IPR008138 -
Viun10g01425 217 Pfam Saposin-like type B, region 2 161 194 IPR008138 -
Viun10g01425 217 Gene3D - 32 109 - -
Viun10g01425 217 PANTHER SAPOSIN-RELATED 29 199 - -
Viun10g01425 217 SMART sapb_4 35 108 IPR008139 -
Viun10g01425 217 SMART sapb_4 120 194 IPR008139 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01425 Viun-Chr10 28452469 28457017 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01425 K12382 - gmx:100527899 356.295