Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01422 ATGTGGAGGTACATCAATGGAAGAATATCCAGAAGATTTTTATCCACTTCTTGTTCCAGTGCCCGTGGTTGGTGGGACCATGTAAAACCAGCCCCAAAGGACCCCATTGTCAGTGTCAACGAGGCCTTTCTATCAGACCCTTTTCCCCACAAGATCAATCTTGGAATGGGAACTTACAGGGGTGATGATGGCAAACCTTTCATTCCTCAATGTGTTCGTGATGCAGAAAAAAAGATTCAGAGATGCAAATTGGAGGAGTTAAACTGTTCCGCAGTGAGAACAAAATTTGTGGAGGAGTGTGTAAAATTGGCATATGGGGATGATTCCTATGTTGTAAAAGAAGGATTTTTTGCAGGAGTTCCGACTCTGTCTGGAACTGCATCATGTAGGCTTTTTGCTGAATTTCAAAGACATTTCTATCCTGAATCTCAAATGTATCTACCAGACCCTACCTGGTCAAATCATCACAATATATGGAGACAAGCTGAAGTTCCTGTCAAAACTTTTCACTACTACCATCCAGATACAAAGGGTTTGGATTTTTCTGCACTCGTAAGTGATGTCAAGAATGCACCAGATTGTTCTTTCTTCTTGCTTCATCCTTGTGCCCACAATCCAACTGGTGTTGACCCTACTGAGGAACAATGGAGAGAAATATCATACCAGTTTAAGGTAAAAAATCATTTCCCCTTCTTTGACATGGCTTATCAAGGATTTTCTAGTGGGGATCTTGACAAGGATGCCATGGCACTTAGAATTTTCCTTGAAGATGGGCATTTAATAGGATGTTCTCAATCATTTTCAAAGAACATGGGATTGTCCGAACATAAAGTTGGTTGTCTTAGTGTTTTGTGCCAGAGTACAAAGCAAGTAGCTGCACTTAAAAGTCAACTGCAGTTGATGTCCCATGCAATCTATAGCAGCATTCCTTTTCATGGTATTTCACTAGTTGCTAAAATATTAAGCGACCCTGATGTAGAAGCACTTTGGAGGAAAGAAATAAAGGTCATGGCTAATCGGATTGAAGCAATGCGAACTACCCTTCGACAATATCTTGAGAACTTGGAATCACCTTTCAACTGGAAGCATATAACTTCTCAGGTTGGCATGTTCTGTTTTTCTGGATTAACACCCGATCAGGTTAAAAAGTTGGAGAAGCTGTTCCATATATACATGACCCTTGATGGAAGAATAAGCATGGCAGGTGTGACCACAAGCAATGTGGCTTATTTGGCAAATGCAATACATCAGGTGACCAGAATCCATGAAGAAGCACTAAGCTCATGTTACGTTTAG 1296 0.4082 MWRYINGRISRRFLSTSCSSARGWWDHVKPAPKDPIVSVNEAFLSDPFPHKINLGMGTYRGDDGKPFIPQCVRDAEKKIQRCKLEELNCSAVRTKFVEECVKLAYGDDSYVVKEGFFAGVPTLSGTASCRLFAEFQRHFYPESQMYLPDPTWSNHHNIWRQAEVPVKTFHYYHPDTKGLDFSALVSDVKNAPDCSFFLLHPCAHNPTGVDPTEEQWREISYQFKVKNHFPFFDMAYQGFSSGDLDKDAMALRIFLEDGHLIGCSQSFSKNMGLSEHKVGCLSVLCQSTKQVAALKSQLQLMSHAIYSSIPFHGISLVAKILSDPDVEALWRKEIKVMANRIEAMRTTLRQYLENLESPFNWKHITSQVGMFCFSGLTPDQVKKLEKLFHIYMTLDGRISMAGVTTSNVAYLANAIHQVTRIHEEALSSCYV 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01422 431 CDD AAT_like 141 417 - -
Viun10g01422 431 FunFam Aspartate aminotransferase 314 415 - -
Viun10g01422 431 Coils Coil 334 354 - -
Viun10g01422 431 Gene3D Aspartate Aminotransferase, domain 1 28 415 IPR015422 GO:0003824
Viun10g01422 431 Gene3D - 82 323 IPR015421 GO:0003824
Viun10g01422 431 FunFam Aspartate aminotransferase 83 323 - -
Viun10g01422 431 Pfam Aminotransferase class I and II 50 415 IPR004839 GO:0009058|GO:0030170
Viun10g01422 431 PRINTS Aspartate aminotransferase signature 197 216 IPR000796 GO:0006520|GO:0008483
Viun10g01422 431 PRINTS Aspartate aminotransferase signature 228 240 IPR000796 GO:0006520|GO:0008483
Viun10g01422 431 PRINTS Aspartate aminotransferase signature 364 382 IPR000796 GO:0006520|GO:0008483
Viun10g01422 431 PRINTS Aspartate aminotransferase signature 296 321 IPR000796 GO:0006520|GO:0008483
Viun10g01422 431 SUPERFAMILY PLP-dependent transferases 24 420 IPR015424 -
Viun10g01422 431 PANTHER ASPARTATE AMINOTRANSFERASE 19 419 IPR000796 GO:0006520|GO:0008483
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01422 Viun-Chr10 28426803 28429984 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01422 K14455 - gmx:100814593 787.719