Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01152 ATGTCATCATCTTTCGGGAGCTCCGACCAGCCGCTCGATGACGACGCCGAGTTCACCGGCTACTCGTTCTCCAATTTCGACGGCAACTCGTCTACGATTTTCGGTGGGGCGTCACACAACGATGGAGATGACGTGTTCTCCCCTCAGGCGGCGCCGGAGACTCCGGCGCCGATCTACTCTGCTTCTGTGGGATTCGATACGTTCTCACAGGAGCAAAACAGAGATGGTGTGGACGGGGGTTTCGGAAACTCCGATGGTCCGATCTTGCCGCCTCCGACGGATGTGGCGGCGGAGGAAGGGTTTGCTCTGAGAGAGTGGCGAAGGAAGAACGCGATTCTATTGGAGGAGAAGGAGAAGAAGGAGAGAGAGATGCGGTCTCAGATAATAGAGGAAGCGCAAGAGTACAAAGTTGAGTTCTACAGAAAGCGTGAGGTTAATGTTGAGAACAAAAAGGCTTCTAATAGGGAAAGAGAGAAGCTATTTTTGGCGGGTCGGGAGAACTTCCATGCTGAAGCTGACAAAAACTATTGGAAGGCAATCGGTGAACTAATTCCACATGAAGTACCTGCAATAGAGAAGAGAGGGAAAAAGGACAAAGAGAAGAAGCCTTCCATTGTTGTAATCCAGGGTCCAAAACCAGGGAAACAAACTGATCTTTCAAGAATGCGCCAAATATTGCTGAAGCTCAAGCATAATCTCCCTCCAAATATGAAACCCAAGCCTCCACCATCTTCAGAAACCAAAAAGGACACGAAAACTGGACCTCCAGATGGAGCTAGTACAGGTTCCAATCCACCCATTGTTGTGCCTGTTGCAACTCCTGAGGTTGTTGCTGCAGCTTGA 843 0.4994 MSSSFGSSDQPLDDDAEFTGYSFSNFDGNSSTIFGGASHNDGDDVFSPQAAPETPAPIYSASVGFDTFSQEQNRDGVDGGFGNSDGPILPPPTDVAAEEGFALREWRRKNAILLEEKEKKEREMRSQIIEEAQEYKVEFYRKREVNVENKKASNREREKLFLAGRENFHAEADKNYWKAIGELIPHEVPAIEKRGKKDKEKKPSIVVIQGPKPGKQTDLSRMRQILLKLKHNLPPNMKPKPPPSSETKKDTKTGPPDGASTGSNPPIVVPVATPEVVAAA 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01152 280 Coils Coil 103 134 - -
Viun10g01152 280 MobiDBLite consensus disorder prediction 1 95 - -
Viun10g01152 280 MobiDBLite consensus disorder prediction 63 77 - -
Viun10g01152 280 PANTHER CLATHRIN LIGHT CHAIN 1 249 IPR000996 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Viun10g01152 280 Pfam Clathrin light chain 97 201 IPR000996 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Viun10g01152 280 MobiDBLite consensus disorder prediction 22 37 - -
Viun10g01152 280 MobiDBLite consensus disorder prediction 188 280 - -
Viun10g01152 280 MobiDBLite consensus disorder prediction 188 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01152 Viun-Chr10 20756255 20758311 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01152 - - aip:107625735 327.02