Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01141 ATGGCGTCACTACTCCTAGCATCACCTCCTCCACTCTCCACTCAATTGCACACTTCCACCTCTCACCTTTCCTTCTCTCACTCCCAAACTCTCTTCTCACCACTCTCCACTCCCTTCCCTTCCCTCTCAGCCTCTGCAACCTCCACGCTCTCCCCAACCCCTTCTGTGTACTGTGGCAGAGGGGACAGGAAAACTGCAAAGGGAAAGCGCTTCGCCCATTCCTTTGGGAATGCGAGGCCAAAGGACAAGAAGAAGGGTAGAGGGCCACCGAGGATTTATGCACCACCGGCACCGTCCAAGAAAGACAGGTTCGAAGATAATGAGGTGGTGAAGATTGAAATTGACGAGTCCCTCTTTTCTGGCTGA 366 0.5328 MASLLLASPPPLSTQLHTSTSHLSFSHSQTLFSPLSTPFPSLSASATSTLSPTPSVYCGRGDRKTAKGKRFAHSFGNARPKDKKKGRGPPRIYAPPAPSKKDRFEDNEVVKIEIDESLFSG 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01141 121 PANTHER 30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC 5 112 IPR044695 -
Viun10g01141 121 Pfam Ribosomal protein S31e 1 102 IPR030826 GO:0005840
Viun10g01141 121 MobiDBLite consensus disorder prediction 1 20 - -
Viun10g01141 121 MobiDBLite consensus disorder prediction 62 89 - -
Viun10g01141 121 MobiDBLite consensus disorder prediction 42 104 - -
Viun10g01141 121 NCBIfam 30S ribosomal protein THX 59 83 IPR030826 GO:0005840
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01141 Viun-Chr10 20546992 20547882 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01141 K19033 - gmx:100805197 160.614