Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01135 ATGGCGCGGCAAGAAAACTCGTCTACTTTTGAGAAGAAAATTTTATCATTAAAAGCTCGAATTCGTTATCTAATCCACCGTTATGAGGCCTTAACTTTCATTGCTGCATTGGTTGTAAGTTACACATTTATGGAGATCGCGGTGTTGGCAATAATGATGGATTATCTCACAAATGCACTCGAAGTGCAGAATCAACGGATAGCTGCTATTGTCACAAATCTGCAAGATGCTTTATCATCTCTCTTTTTTGTTGTTGTTTCTCTAATCTCGCAAACATATACTGGTTCTTTCACTATGATCACATTTTGTGCTGCAGCTTCCATCGAGGGTTTAATGCTACTATGGACATCTACATCACCTTCAGCGTTTGGTGCGGTCTTTGCAGCCATAGTCTTCCTTGGAATTGGAAAAAGTGGTCAAAAGCTTTCAGAAAATTTCCTTGAGTATCAGTTGGAAGAGAAAATGAAAACAAAGAAACAAGGCGAAGAAGATGGAAGCACACAAGACAGAAATGAGAGAAGCCTCGGACATACAATTTTTATTAATATCTGGCTGTTCGCTCCACTGGTTGTTGGATACATCATAACAATTTGTCTTGTCTTCATCTTCTATGATGTAACATTAGAGGACCTATTCAGATTCGCTGCACTTCTCATGGGAGCGACTAATCTGTTGTTCCTCATCGGTTCTTTGGGGTATAGCCGCCAAGAATTACCCGTTGAAAGCGATCTAAGCAAGATCCATAGAATCTTCAGCACAGCTTTAGGAAAACTGAGTTCAAAATATCCAACCTCGCCGAATTCTTATTACTGGAAGGGTTACAAGCAGCAACATACGTATAGTCGTGGTGAAGGAGTGAGGTTATTGCCACGAGTTCCACGGCTATTCAGGTGGTTGGACAAAGCGGCCATCATTAAAGAAGAGGAAGAAGAAAAAGAAGATTCAAGACATGATAGAGAGAGTCTTGAGACGCAAGAAAGGAAAAAGAAGATTTGCACTGTGAAGGACGTGAGAGATGTTAAAAGCCTTGTTCATATGATCTACCTTGGCCTTACCATTTTTCCTTATAGTTTACTCATGGCCTCTGGGAACACTTTCTTTGTTGCACAAGCAAGTGCGTTGACACCAGTTATGAATAAAAAGGGTAACGATATCTCTATTCTATTTTTGATCAAAGCCGTGGCAACTGACATGTCAAACTTTACTTGTTTTCTCATCAGTCTTGCATTTCGAAACAAGCAAAAACCAAGAGTTACCTATGTCATGTTCGAAAGAAAAGCTGCGACAATCACGAGGATTGGATTTGGCATTACGTGTGCTGTAATATGCGGCTTCATAGCATGGCAAGTGGAGATTCGTAGGTTGTCGTCAAAGGTGGATACAACAGTCGCTTTGGTTCCGCAGTTTTTGTTACTAGGAGTGACACAGGGACTTGTTGACGGGGGATTAGAGAGATTATTCGATGACCATGTAGCGAAATCGTTGTCGAGTTTTGAGGATTCGTTTAGTGAGTTGGTGGTTGGTGGTGGAAAACTTCTGATTATACCAAGTGTGTTGATTTTCAGTGGGTGGATCAAGGAAACAATCGACACTAGCCATTTGGACAGGTACTATCTGATGTTGGCGATAATGAATGCTGTGCTGCTTCTGGCTTTTGCATACTACTCTGTCACATATGCATACAAGGAAGTGTGTCCCGAAGATGAGAAAGTTACCACAGAGCAAAGATTGGATCATGCTCATCAACCAGACTCAGAAAACACCTATCAGGAAAATACTCCCCCATTTCCATAA 1794 0.4114 MARQENSSTFEKKILSLKARIRYLIHRYEALTFIAALVVSYTFMEIAVLAIMMDYLTNALEVQNQRIAAIVTNLQDALSSLFFVVVSLISQTYTGSFTMITFCAAASIEGLMLLWTSTSPSAFGAVFAAIVFLGIGKSGQKLSENFLEYQLEEKMKTKKQGEEDGSTQDRNERSLGHTIFINIWLFAPLVVGYIITICLVFIFYDVTLEDLFRFAALLMGATNLLFLIGSLGYSRQELPVESDLSKIHRIFSTALGKLSSKYPTSPNSYYWKGYKQQHTYSRGEGVRLLPRVPRLFRWLDKAAIIKEEEEEKEDSRHDRESLETQERKKKICTVKDVRDVKSLVHMIYLGLTIFPYSLLMASGNTFFVAQASALTPVMNKKGNDISILFLIKAVATDMSNFTCFLISLAFRNKQKPRVTYVMFERKAATITRIGFGITCAVICGFIAWQVEIRRLSSKVDTTVALVPQFLLLGVTQGLVDGGLERLFDDHVAKSLSSFEDSFSELVVGGGKLLIIPSVLIFSGWIKETIDTSHLDRYYLMLAIMNAVLLLAFAYYSVTYAYKEVCPEDEKVTTEQRLDHAHQPDSENTYQENTPPFP 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01135 597 Pfam POT family 107 501 IPR000109 GO:0016020|GO:0022857|GO:0055085
Viun10g01135 597 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 31 559 - -
Viun10g01135 597 Coils Coil 305 325 - -
Viun10g01135 597 MobiDBLite consensus disorder prediction 572 597 - -
Viun10g01135 597 Gene3D MFS general substrate transporter like domains 19 566 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01135 Viun-Chr10 20359036 20368101 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01135 28 575 Organic Solute Cotransporters AT3G54450 23.630 7.04e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01135 K26562 - pvu:PHAVU_010G004400g 441.039