Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01127 ATGGCCACCCCCTCTTGGATCAAAATTGTTCACGTGCATCAGGTTTTTGGATCAACCATTCGCGCTGCTGGGATTGTTTCATCAAGGGCTGGAGCTTCTCTTCCTGCTTTGGTTGTAACCTACAAATATGTAGAAATCGCAGTGGTGTCTATATTGATGGATTACTTCAACGATTCAATGGAGGAGGAGAATCAACGATTAGCAGCCATTGTTACAAATCTTCAAGATGGTCTATCATCGCTATTCGTAGTTATTGTTTCTCTAATCTCAGAAGCATATACCGGTTATTACACTATGATAACGATTTGCACTGCAGCTTCAATAGAGGGTTTAATGCTACTATGGACATCTGCATCATCAACCAAACCTTCCACATTCCGTGCGGTCTATGCAGCCATATTCTTCCTAGCACTAGGAAGCAGTGGTCAAAAGCTTATAGAAAATTTTCTTGAATACCAATTGGAGGAGAAAATTAAAGCCAGACATGAGAGTGAAGCAGTACGTAGTGGAACCACAGAAAACCAAAAGGAGGAAGATTTCACGGATAAAGTGCTAATTAAAAGCTGGTTGTGCGCTCCGTTTGTTGTTGGATATATCATAACAATTTGTTTGGCCTTCATCAGCATCGATACAACGTACGAGCACTGGTTCCAATTCACGGCACTTATCATGTGTGGGACTTACATGCTGTTCCTCGCTGGTTCGGCGTGGTACAGCCACGAACAATTGCCCATTGAAAGCAATCTGCACAAGATTTACAGAATCTTGAAAGCAGCTTTAGGGAAACGACATGCAAAATATCCAACCTCGCCTGGTCGCTATTATTGGAAAGATAGTAAGCGAGATCATTTTTATAAATACGGTGAAGGAGTAAGGTTACTTCCACGAGTTCCACGTCTGTTCAGGTGGTTGGACAAAGCAGCTATACTTGAAGCAGAAGCTTCCACAGTGAGTCTGGAGTTGCAAGAAAAGAATGAGAAGCTTTGCACAGTAGAGGAAGTGAGGGATGTGAAAAGCCTTGTTCCCATGTTTTACCTGTGCTTTGCATTCTTTGGCTACAGTTTACTCGTGGCCACGGAGAGCACTTTCTTTGTTGCACAAGCAAGCAACATGACCTCAAATATTACAACCAATGGCAATGATATCTCTATTCTCGTTTTGATCATGGAGGCCACGAGTGATGTGTCACGATTCATCTGGTTTCTCATTGGTCGTGCCTTTCGACACTTCACAAAATTCAGTTGTATCGACAACGTGTGCAACAAGAAAGCAGCCATTGCAAGGATTGGTTTTGGCATGGTTTGTGCAGTAATTTGTAGCCTCATAGCATGGCAAGTTGAGGTTGGTAGGTTGAAGATAAGCAAGCAGATGGAGTATGAGGATGGTAGAAACTCCACAGTGGCATTGATTCCGCAATTTTCAGTGTTGGGAGTCACAAACGGGCTTGTTGAAGGTGGAATCACGAGTTTGTTCCATGGGAACGTGGCGAAATCAATGTGGAGTTTTGATGATTCATACAAGGAATTGGTGATCGGTAGTGGAAAACTCATGATCATACCACTGGTCTTGAGTATCCCTAGTTGGTTCAGTGATACTTTGAACTCAAGTCGTTTGGATAAGTTCTATCTGATGTTGGGAATATTGAACGCTGCGTTTCTTCTGGTTTTTTTTTACTACTCCTTCAGATATGCGTACAAAGAAGTATGTCCCCAAGATGATCAAGAAGTTGAAGAATTCACGGGGGCAAATGCGGATTTCGTTTCCGAAAGTACCATTGAGATAGAGTCCAAAGACCATAGTACTGACACAGACTAA 1815 0.4253 MATPSWIKIVHVHQVFGSTIRAAGIVSSRAGASLPALVVTYKYVEIAVVSILMDYFNDSMEEENQRLAAIVTNLQDGLSSLFVVIVSLISEAYTGYYTMITICTAASIEGLMLLWTSASSTKPSTFRAVYAAIFFLALGSSGQKLIENFLEYQLEEKIKARHESEAVRSGTTENQKEEDFTDKVLIKSWLCAPFVVGYIITICLAFISIDTTYEHWFQFTALIMCGTYMLFLAGSAWYSHEQLPIESNLHKIYRILKAALGKRHAKYPTSPGRYYWKDSKRDHFYKYGEGVRLLPRVPRLFRWLDKAAILEAEASTVSLELQEKNEKLCTVEEVRDVKSLVPMFYLCFAFFGYSLLVATESTFFVAQASNMTSNITTNGNDISILVLIMEATSDVSRFIWFLIGRAFRHFTKFSCIDNVCNKKAAIARIGFGMVCAVICSLIAWQVEVGRLKISKQMEYEDGRNSTVALIPQFSVLGVTNGLVEGGITSLFHGNVAKSMWSFDDSYKELVIGSGKLMIIPLVLSIPSWFSDTLNSSRLDKFYLMLGILNAAFLLVFFYYSFRYAYKEVCPQDDQEVEEFTGANADFVSESTIEIESKDHSTDTD 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01127 604 Pfam POT family 201 504 IPR000109 GO:0016020|GO:0022857|GO:0055085
Viun10g01127 604 Coils Coil 307 327 - -
Viun10g01127 604 Gene3D MFS general substrate transporter like domains 36 570 IPR036259 -
Viun10g01127 604 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 48 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01127 Viun-Chr10 20139941 20145137 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01127 62 583 Organic Solute Cotransporters AT3G53960 25.933 2.04e-32 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01127 K26562 - pvu:PHAVU_010G004400g 479.559