Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00923 ATGAGCCAAATTCCATGGGCAACCATTGGAGTGGTGACCGGCTGGTACAGTTCCAACATCGGTGTGCTCCTTCTCAACAAGTACTTGCTCAGCAACTACGGCTTCCGGTTCCCGGTTTTCCTCACCACGTGTCACATGCTCCTGAGTTCGCTTCTCAGCTACGTTATTTCCGTAACGGACATGGTTCCGTTGCAGAGCCTGCGCTCGCAGGCGCAGTTCTGGAAGATCGTCGCACTCAGCGTCGTTTTCTCCTTCTCCGTCGTCTGCGGCAACGCTTCGCTCAGGTTCATTCCGGTCTCGTTTAACCAGGCCATCGGCTCCACCACCCCCTTCTTCACCGCCGTTTTCGCCTACGCCGTCACCAGCAAGAGAGAGGCCTGGGTCACGTATGCCACGCTCTTGCCTGTTGTCTCAGGAGTCATCATTGCCAGCGGGGGTGAACCAAGTTTTCATCTGTTTGGATTTGTAATCTGTGTTTCATCGACTGCTGCCAGAGCATTCAAATCAGTGCTTCAGGATATTTTGTTGTCCTCAGAGGGAGAAAAGTTGAATTCTATGAACCTGCTGCTTTATATGGCTCCTATAGCAATGATGGTCTTACTTCCTACCACATTGTTTATGGAGGGAAATGTGATTGGGATCACAATAGATCTTGCCAAAAAGGATATCAGAATTTTTTGGTATCTGCTTCTCAGTTCTTCTCTTGCATATTTTGTGAACCTGACTAATTTTTTGGTGACGAAACATACAAGTGCACTAACCCTTCAGGTATTGGGAAATGCAAAGGGAGCAGTAGCTGTGGTGGTCTCAATTTTGATATTCAAAAACCCTATTTCAGTGATGGGGATGTTTGGCTATGCACTCACTGTCAGTGGAGTTATCTTGTACAGTGAAGCCAAGAAGAGGTATAGCAAAAGTTAG 921 0.4777 MSQIPWATIGVVTGWYSSNIGVLLLNKYLLSNYGFRFPVFLTTCHMLLSSLLSYVISVTDMVPLQSLRSQAQFWKIVALSVVFSFSVVCGNASLRFIPVSFNQAIGSTTPFFTAVFAYAVTSKREAWVTYATLLPVVSGVIIASGGEPSFHLFGFVICVSSTAARAFKSVLQDILLSSEGEKLNSMNLLLYMAPIAMMVLLPTTLFMEGNVIGITIDLAKKDIRIFWYLLLSSSLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFKNPISVMGMFGYALTVSGVILYSEAKKRYSKS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00923 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 59 146 - -
Viun10g00923 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 195 297 - -
Viun10g00923 306 PANTHER SOLUTE CARRIER FAMILY 35 9 301 - -
Viun10g00923 306 Pfam Triose-phosphate Transporter family 11 297 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00923 Viun-Chr10 12788665 12791585 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00923 8 302 Organic Solute Cotransporters AT3G11320 77.703 4.01e-167 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00923 - - gmx:100799632 513.842