Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00760 ATGGCTGCTTCAGTGCCAACTTTTGGAGCTGTTAACATGGCACCGTTGAAACTGAATGGCTCTAGCAGTGGAGTGGCAGGCTCTGCATTGTTTGGAACCTGTTTGAAGAAAGTCAGTTGTGTGAGTTCTAGCCAGAAGAGTGTGTGTGGGAATTTCAAGGTTCGTGCACAGATTGAATATGATGAGGAGAAGCAGACTTCAAAGGATAGATGGGCTGGACTTGCTTATGACACTTCCGATGACCAGCAAGATATCACTAGAGGGAAGGGAATGGTGGACACTCTCTTCCAAGCTCCCATGGAGAGTGGCACTCACTATGCTGTCATGAGTTCCTATGATTACATCAGTGCTGGTCTTCGTCAGTACAATTTGGACAACACCATGGATGGCTTCTATATTGCTCCTGCATTCATGGATAAGATTGTTGTTCACATCACCAAGAACTTTTTGTCCTTGCCAAATATTAAGGTTCCTCTTATTTTGGGTATTTGGGGAGGCAAGGGTCAGGGGAAATCTTTCCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATAATGATGAGTGCTGGAGAACTGGAAAGTGGAAATGCTGGAGAGCCTGCAAAGTTAATCAGACAAAGGTACCGTGAGGCAGCAGACATTATCAGAAAAGGAAAGATGTGTTGTCTGTTCATCAATGATCTTGATGCTGGAGCTGGTAGGCTTGGTGGAACAACTCAGTACACTGTGAACAACCAGATGGTGAATGCAACCCTCATGAACATTGCTGACAACCCAACCAATGTCCAACTTCCTGGCATGTACAACAAGGAGGAGAATCCCCGTGTTCCAATCATAGTCACTGGCAATGACTTCTCAACATTGTATGCTCCTCTCATTCGTGATGGACGTATGGAGAAGTTCTATTGGGCACCTACTCGAGATGACAGGATTGGTGTCTGCCAAGGCATTTTCAGAACAGACGGTATTCCAAAGGAGGACATTATCAAGCTTGTTGACACTTTCCCTGGACAATCTATTGATTTCTTTGGTGCCTTGAGGGCCAGAGTGTATGATGATGAAGTGAGAAAGTGGATTTCTGGTGTGGGAGTGGAGAATGTTGGGAAAAAGCTAGTGAATTCAAAGGAGGGACCACCAACTTTTAAGCAACCACAGATGTCTCTTAACAAGCTCCTTGAGTATGGAAACATGCTTGTCCAAGAGCAAGAGAATGTGAAGAGAGTTCAACTGGCTGACAAATACCTCAAAGAGGCTGCACTTGGAGATGCAAATGAAGATGCCATAAAGACAGGAAACTTCTATGGACAAGCAGCTCAGCAAGTTCATGTTCCTGTTCCTGAAGGTTGCACTGACCCTACTGCACAAAACTATGATCCAACAGCCAGAAGTGATGATGGAAGCTGCACATACACACTTTAG 1425 0.4505 MAASVPTFGAVNMAPLKLNGSSSGVAGSALFGTCLKKVSCVSSSQKSVCGNFKVRAQIEYDEEKQTSKDRWAGLAYDTSDDQQDITRGKGMVDTLFQAPMESGTHYAVMSSYDYISAGLRQYNLDNTMDGFYIAPAFMDKIVVHITKNFLSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCQGIFRTDGIPKEDIIKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVENVGKKLVNSKEGPPTFKQPQMSLNKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANEDAIKTGNFYGQAAQQVHVPVPEGCTDPTAQNYDPTARSDDGSCTYTL 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00760 474 PANTHER - 41 472 IPR044960 -
Viun10g00760 474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 332 IPR027417 -
Viun10g00760 474 Gene3D - 308 420 - -
Viun10g00760 474 MobiDBLite consensus disorder prediction 455 474 - -
Viun10g00760 474 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 123 307 - -
Viun10g00760 474 Pfam ATPase family associated with various cellular activities (AAA) 163 304 IPR003959 GO:0005524|GO:0016887
Viun10g00760 474 MobiDBLite consensus disorder prediction 451 474 - -
Viun10g00760 474 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 308 420 - -
Viun10g00760 474 Gene3D - 123 307 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00760 Viun-Chr10 8084978 8088994 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00760 - - gmx:100795298 889.797