Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00690 ATGTACGCTGATCGCGTGGAGAATGGAGGGCGGAGGTCCGTGAAGGAACGCCTAAATGGGAATGGTATCAGTGGCCCTACTCGGCACCAGCAACAGCGTCAAATCACCGGCAAGAGGTCGAGGCAAGATGATAAGTGGGAACATGATCTCTTTGATGATGATGAACCACGGATCACTAATCGGAAGGTTAGTGCTCAAGATCTGCGCCTCAAGCTTCAAAGGAAAGGTCTTCAACCTGCATCTCAGAGTGGAAAGAGTTATGCTCCGAAGATGCGGGATCTCCGTGAAAGGTTATCAGGGACAATGACAGTACAACCTACCAGTGTTGATCCGCCAAAATCAAAAGCTGTTAAACCAAGCAGTAAAAGTGTTGGTGTTGAGGCCCCTGCAGCGCAGATCAAAAGGCCAGCTGACCCAGCTCCTAAAAAGTCACGGAAGGCTGATTCTTCAATTGATGACTTCTTGCAGTCCGTGGGTCTTGAAAAGTACCTTATTACTTTTCAGGCTGAAGAAGTTGATATGACAGCACTCAATCATATGAATGACGAAGATCTCAAGGCTATGGGTATACCAATGGGACCAAGAAAGAAGATACTTTTAGCGTTGGAGTCGAAAGTCTGA 621 0.4718 MYADRVENGGRRSVKERLNGNGISGPTRHQQQRQITGKRSRQDDKWEHDLFDDDEPRITNRKVSAQDLRLKLQRKGLQPASQSGKSYAPKMRDLRERLSGTMTVQPTSVDPPKSKAVKPSSKSVGVEAPAAQIKRPADPAPKKSRKADSSIDDFLQSVGLEKYLITFQAEEVDMTALNHMNDEDLKAMGIPMGPRKKILLALESKV 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00690 206 CDD SAM_superfamily 153 203 - -
Viun10g00690 206 FunFam Sterile alpha motif domain-containing protein 148 206 - -
Viun10g00690 206 ProSiteProfiles SAM domain profile. 146 206 IPR001660 GO:0005515
Viun10g00690 206 PANTHER SCP160 104 202 - -
Viun10g00690 206 Pfam SAM domain (Sterile alpha motif) 147 203 IPR001660 GO:0005515
Viun10g00690 206 MobiDBLite consensus disorder prediction 1 66 - -
Viun10g00690 206 SUPERFAMILY SAM/Pointed domain 149 203 IPR013761 -
Viun10g00690 206 MobiDBLite consensus disorder prediction 102 149 - -
Viun10g00690 206 MobiDBLite consensus disorder prediction 36 66 - -
Viun10g00690 206 SMART SAM_4 143 206 IPR001660 GO:0005515
Viun10g00690 206 MobiDBLite consensus disorder prediction 72 91 - -
Viun10g00690 206 Gene3D - 148 206 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00690 Viun-Chr10 7042877 7053252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00690 41 205 Glycosyltransferase AT3G07170 59.880 2.46e-60 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00690 - - gmx:100784706 334.724