Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00683 ATGAAAAGTTTAAGTTGTTTGTTGGTGTTTTCTTTGGGAATTTTCATCCAAATGAGTTACTGTCATAGCAGCATCACAACATGCTTGCCTCAGAAAAATGCTGCACTATTCATACTCGGAGATTCATTATTTGATAATGGAAACAACAACTACATCAACACCACCATCTCTTACCAAGCAAATTATTATCCCTATGGTGAAACTTTCTTCAAATACCCCTCTGGCAGATTTTCTGATGGACGCATGATACCAGATGTCGTTGCTGAACTTGCTAAGTTGCCAATACTTCCACCATACTTGCATCCGGGTCGTGTTGAACACGTCTATGGTGTCAATTTTGCTTCAGGAGGTGCTGGTGCTCTGCGTGAAACCTCTCAAGGATTTGTGATAGACCTCAAAACTCAGGTAAGTTATTTAAAAGATTTAAAGAATGTGTTCAGTGAGAGACTGGGAAACGCAGTAGCAGAGGAAATTGTGTCAAAATCAGTGTACTTGATTAGCATTGGATCCAATGACTATGGCACTCTTCTCAACCCAGACTCAGATCCTGTGTTTCCTCCTGGTGATCATCAAGGGTTTGTTGATTCTGTCATTGGAAACCTCACAGATGCCATCAAAGAAATTTATAATGTTGGTGGAAGGAAATTTGGATTTGTTAATGTGGGTCCAATAGGTTGTGTACCTGCCATAAGAGTTTTGGTGAATAATGGAAGCACATGCCTTGAAGAATTTTCAGCCATCGCAAGACAACACAACACTGCACTTTCAGAGAAGCTTCTTGAGCTAGAGAAACAGCTCAAGGGATTCAAATATTCAGTCAATGATTTCTATGGGGCACTTTCTGAAGTGCTGAACAATCCAACAAAATATGGTTTTAAAGATCCTAGTGTGGGATGTTGTGGAGGTGGAGCATACAGAGGAGACCAAAGCTGTGGAGGGAACAAAGGGACCAAAGAATACGAGTTATGTGACAACGTCAATGAACATCTGTTCTTCGATTCTAATCATGTTACTGATAGAGCTAGCCAGCATTTCGCAGAGTTGATATGGAATGGAAATCACTCTGTCACAACTCCTTACAATTTGAAACAACTATTTGAATTTTGA 1107 0.4011 MKSLSCLLVFSLGIFIQMSYCHSSITTCLPQKNAALFILGDSLFDNGNNNYINTTISYQANYYPYGETFFKYPSGRFSDGRMIPDVVAELAKLPILPPYLHPGRVEHVYGVNFASGGAGALRETSQGFVIDLKTQVSYLKDLKNVFSERLGNAVAEEIVSKSVYLISIGSNDYGTLLNPDSDPVFPPGDHQGFVDSVIGNLTDAIKEIYNVGGRKFGFVNVGPIGCVPAIRVLVNNGSTCLEEFSAIARQHNTALSEKLLELEKQLKGFKYSVNDFYGALSEVLNNPTKYGFKDPSVGCCGGGAYRGDQSCGGNKGTKEYELCDNVNEHLFFDSNHVTDRASQHFAELIWNGNHSVTTPYNLKQLFEF 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00683 368 Pfam GDSL-like Lipase/Acylhydrolase 36 349 IPR001087 GO:0016788
Viun10g00683 368 SUPERFAMILY SGNH hydrolase 36 352 - -
Viun10g00683 368 Gene3D SGNH hydrolase 27 354 IPR036514 -
Viun10g00683 368 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 15 367 IPR044552 -
Viun10g00683 368 CDD SGNH_plant_lipase_like 35 353 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00683 Viun-Chr10 6875764 6878054 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00683 35 367 Acyl Lipid Metabolism Gene Families AT4G10950 31.686 1.62e-45 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00683 - - gmx:100808852 605.905