Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00679 ATGGCACAACGTTCTCATGTACCAAAATTTGGCAATTGGGATAGCGGAGAGAATGTTCCTTACACAGCATATTTTGACAAGGCCCGAAAAGGCCGAACTGGTGCAAGAATAATAAATCCAAATGACCCTGAAGAAAATTCTGATTTAGGTCTTGACAATCCATCATCTGAGCAACTACCTCCATCCAAACCCAGAGTTAGTTCAGAGGATCCATCTGGAAAGGGATCTCTACCTTTGGAAGATGATCCTAAGCATTTCATCGACTCTCCGGCGCGTCATGACAATGTAAGCAATAGGACTAGCAGCAGAAGCCACGGAGTAAGTTCTGCTGAAAACCGTAGAAGACATTCTACACAAAGTGTTGGGTCTGAGCACAGCATCGAACGTTCTCCACTTCATCGCCAGGCCAGACCCCCAGGCAGAGACAGCCCCCAATGGGAACCAAAGAATTCATATGACAACCTCCAGGGAACACCGGGAAGATCTCGGTTAAGACAGGCTAACCGGGGAGATGAAACACCAGATAAAGGTGCAGCTGTGCCAAAGTTTGGTGACTGGGATGTGAACAACCCAGCATCAGCAGATGGCTTTACTCACATTTTCAACAAAGTGAGGGAGGAGAGACAGGGAGGGCCGGCGCAAGTTCCGGGCACGCCTAACGATAGACCACAACATAACAAGGGTCAATTCTCTGATGACAAAGTCCAGTGTTGCTGTTTTGCCTGGGGCAAAAAATGA 738 0.4783 MAQRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENSDLGLDNPSSEQLPPSKPRVSSEDPSGKGSLPLEDDPKHFIDSPARHDNVSNRTSSRSHGVSSAENRRRHSTQSVGSEHSIERSPLHRQARPPGRDSPQWEPKNSYDNLQGTPGRSRLRQANRGDETPDKGAAVPKFGDWDVNNPASADGFTHIFNKVREERQGGPAQVPGTPNDRPQHNKGQFSDDKVQCCCFAWGKK 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00679 245 MobiDBLite consensus disorder prediction 108 136 - -
Viun10g00679 245 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 6 238 IPR040387 -
Viun10g00679 245 MobiDBLite consensus disorder prediction 93 107 - -
Viun10g00679 245 MobiDBLite consensus disorder prediction 205 231 - -
Viun10g00679 245 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 174 209 IPR008700 -
Viun10g00679 245 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 3 32 IPR008700 -
Viun10g00679 245 MobiDBLite consensus disorder prediction 28 191 - -
Viun10g00679 245 MobiDBLite consensus disorder prediction 75 92 - -
Viun10g00679 245 MobiDBLite consensus disorder prediction 46 65 - -
Viun10g00679 245 MobiDBLite consensus disorder prediction 147 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00679 Viun-Chr10 6801447 6807542 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00679 K13456 - gmx:100499218 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g01760 5 15818290 15828341 Viun10g00679 10 6801447 6807542 PCT