Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00655 ATGGAGCATTTGGGCGAGGTTGGTTTAAAGCGTGAGAATGGAGTCAGAATGTGTGATGGAAAAGAGTGTTTTGAGAACGAGAGCAGCACAACTTCCATTGAAGATGCTGTGAAAGTGTTGTTGATGGGTTTAGGAGAAGATATCAATAGAGAAGGCATTAGAAAGACACCACTTCGTGTTGCCAAAGCCCTTCGTGAAGGAACCAGAGGTTATGTTCAAAGTGTGAAGGAAATTGTGGAAGGTGCATTATTCCCTGAAGCTGGTCTAGACCATACCGAATTCGCTGGTGATGCAGGTGGAGTAGGTGGAGTTGTGATTGTGAGGGACCTTGAGTTTTACTCCTACTGTGAGTCTTGCATGCTACCATTCTATTTCAAGTGCCATGTGGGGTATGTCCCTTCTGCACAAAGAGTTCTCGGTTTAAGCAAACTCTCTCGTGTCACCAATGTGTTTGCAAAACGTCTCCAAGAACCTCAAAGACTTGCAAATGAGGTGTGTTCTGCTTTGCATGAAGGAATTCAACCCACAGGTGTTGCTGTTGTGCTTCAATGCAAACACATTCCCTTTTCAGACATGGAATCAAACTCTCTTGGCTCAAACCACAAAGGGGTGATGGGGATACTGGTTTCTTCTGGTTCTGGTGTTTTTGAAAACAAAGATGCAAACTTGTGGGCTGACTTTTTTGGCCTTCTACAATTTAGGGGCATTGAGAAGGACAAAATTCATGATAAGGGGTCAATGGACGACCAATGTTGGTGTCCTTCTTTGTCTTCTAAAGTCTCATCCGAGAACGAAGAGCTGAACCCTGCTATGCTCACTGCAGTAGCTTCAATTCTCAAGTCTTTAGGCGAGGATCCAACTAGGAAGGAATTAGAAGGGACTCCTGCTAGGTATACCAAATGGCTGATCAACTTCAAGTGTAGTAGCATTGAGAGGGCGCTGAATTGTTGGCTTGGGATTCGGACAAATGGTGCTTTGAACACTAATGAGGGGTTAGGTTTTGATGAAAAGCTACACTCAGAGCTGAACTTGCCTTTTCTGTCACAGTGTGAGCATCATTTGCTTCCATTTCATGGTGTTGTTCACATAGGATACTTCGTTTCCAAAGGGTTTCATCCCATTGAGAAAACCCTTTTGCAGTCAATAGTGCATTTTTATGGTATTAAGTTGCAGGTTCAAGAAAGACTCACCAAGCAGATTGCAGAAACTATTTCCCCACTGATTGGTGGAAATGTGATAGTTGTTGTGGAAGCAAGTCACACATGCATGATTTCTAGAGGAATTGAGAAATTTGGAAGTAATACAGCTACCATTGCAACATTGGGATGCTTTTGTACTGACCTTGGAGCAAGAACCTCATTCTTGGAGAGTATTCCAAATGACAAATACATCTCTTTAAGATAG 1404 0.4295 MEHLGEVGLKRENGVRMCDGKECFENESSTTSIEDAVKVLLMGLGEDINREGIRKTPLRVAKALREGTRGYVQSVKEIVEGALFPEAGLDHTEFAGDAGGVGGVVIVRDLEFYSYCESCMLPFYFKCHVGYVPSAQRVLGLSKLSRVTNVFAKRLQEPQRLANEVCSALHEGIQPTGVAVVLQCKHIPFSDMESNSLGSNHKGVMGILVSSGSGVFENKDANLWADFFGLLQFRGIEKDKIHDKGSMDDQCWCPSLSSKVSSENEELNPAMLTAVASILKSLGEDPTRKELEGTPARYTKWLINFKCSSIERALNCWLGIRTNGALNTNEGLGFDEKLHSELNLPFLSQCEHHLLPFHGVVHIGYFVSKGFHPIEKTLLQSIVHFYGIKLQVQERLTKQIAETISPLIGGNVIVVVEASHTCMISRGIEKFGSNTATIATLGCFCTDLGARTSFLESIPNDKYISLR 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00655 467 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 258 459 - -
Viun10g00655 467 Gene3D - 334 461 IPR043133 -
Viun10g00655 467 PANTHER GTP CYCLOHYDROLASE I 17 187 IPR001474 GO:0003934|GO:0046654
Viun10g00655 467 FunFam GTP cyclohydrolase 1 99 234 - -
Viun10g00655 467 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 22 231 - -
Viun10g00655 467 Pfam GTP cyclohydrolase I 273 458 IPR020602 -
Viun10g00655 467 Pfam GTP cyclohydrolase I 33 187 IPR020602 -
Viun10g00655 467 Gene3D - 98 234 IPR043133 -
Viun10g00655 467 Gene3D - 258 309 IPR043134 -
Viun10g00655 467 Gene3D - 21 78 IPR043134 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00655 Viun-Chr10 6133656 6136738 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00655 K01495 - gmx:100792313 659.062