Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00602 ATGAGTTTCCGTTCTTCCATGAACGCCGTTACCCTTCTTCTCTTCTTCTTTTTCATTTCCGCATTAGTTTGTGCCAAGAAGACCGCTGATGTGACGGAGTTGCAGATAGGCATTAAGCATAAACCAGCAACATGTGAAGTTCAGGCACACAAAGGTGATAGAGTCAAAGTACACTATCGGGGAAAACTCACTGATGGAACTGTGTTCGATTCTAGCTTTGAGAGAAAAAATCCCATTGAATTTGAGCTTGGTGCTGGTCAAGTGATCAAAGGGTGGGACCAGGGATTATTGGGAATGTGTCTTGGTGAGAAGAGGAAGCTGAAAATACCATCAAGACTGGGCTATGGAGATCAGGGTTCCCAACCCTCTATTCCAGGTGGTGCAACACTGATATTTGACACTGAGCTGGTGGGAGTGAACGGTATAAGTTTCGATGAAGAAGACGACGACTCTAAGACAGGCTCCGAACTGTAG 474 0.4536 MSFRSSMNAVTLLLFFFFISALVCAKKTADVTELQIGIKHKPATCEVQAHKGDRVKVHYRGKLTDGTVFDSSFERKNPIEFELGAGQVIKGWDQGLLGMCLGEKRKLKIPSRLGYGDQGSQPSIPGGATLIFDTELVGVNGISFDEEDDDSKTGSEL 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00602 157 PANTHER PEPTIDYLPROLYL ISOMERASE 11 141 IPR044609 GO:0000413|GO:0003755|GO:0061077
Viun10g00602 157 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 52 140 IPR001179 GO:0003755
Viun10g00602 157 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 46 137 IPR001179 GO:0003755
Viun10g00602 157 Gene3D - 20 140 IPR046357 GO:0003755
Viun10g00602 157 FunFam Peptidylprolyl isomerase 20 140 - -
Viun10g00602 157 SUPERFAMILY FKBP-like 33 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00602 Viun-Chr10 5610076 5613957 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00602 22 156 Calmodulin-binding Proteins AT3G25230 28.873 1.26e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00602 K09569 - gmx:100305479 253.447