Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00599 ATGTCTCGCACTCCCAACTACGAGTTCCAGGAATGGTGGAACAAGCAGCGTGAGAAGAACAACAACAACTTCGATCCCCTCAACGACGCAAAACTCGACCACTCCCACTCAGCCTCTCCGCCGCCCTTCACCGCCCTCGACGTTGACTTCTCCTCCTCCTCCTCCTCTTCCGTCGCATCCAAAAAAGAACGCTCCCGGAGCGCCCGCCAGCTCTCCTGGGTATGCCTTCTCAAATGCCAGCAGCTAGCCGCCTCGCTCGGCTGGCTCTACGGCGGCGTCTTCCACCTCGCCCGCACCGCGCACCGCCGGATCGCGGACTCAGCGTCGCTGCGGGGGGACTCGTCGAGGCTCTACCGCGCGATCCGCGTGTTCCTCGTGGTGGTGATTGTGCTCTTGGGGTTCGAGCTCGTCGCGTATTTCAAGGGGTGGCATTTCAGGCGCCCCGATCCCAGCGACGTTCTGGGCATGCTCGCCGTCGCTTACGCCGTGTGGGTCGACGTCCGCGCCCGGTACCTGTCGCCGCCGTTGCAGAGCCTGGCGAATTTGTGCACCATTTTGTTCATCGTGCAGACGGTAGACAGGGTCGTTTTGATCTTGGGGTGCTTCTGGATCAAGTTTCGGAGGCTCAAGCCTGTGGCCAGTGTGGATTACGATGTTGTGGGTATTAGCGCGGAGGATTTCCCCATGGTGTTGGTTCAGATTCCCATGTGCAATGAGAGGGAGGTTTACCATCAATCCATTGGAGCAGTTTGTATCCTGGATTGGCCAAAGGAGAGAATGCTCGTTCAGATTCTTGATGATTCGGATGAAGTAGATACCCAACAGCTTATCAAGGCAGAAGTGCATAAATGGCAACAAAGGGGTGTTAGGATAATATATAGGCACCGGCTTCTACGTACAGGCTACAAGGCAGGGAATCTTAAATCAGCAATGGGCTGTGATTATGTTAAGGATTATGAGTTCGTTGCAATATTTGATGCTGATTTTCAGCCAACACCGGATTTCTTAAAGAAAACAGTGCCCTATTTCAAGGGAAGGGATGATTTGGCATTAGTTCAGGCAAGATGGGCATTTGTAAACAAGGATGAGAACTTGCTTACAAGATTGCAGAATATCAATTTGTCTTTCCACTTTGAGGTAGAACAACAGGTGAATGGTATCTTCCTTAACTTCTTTGGTTTTAATGGAACTGCTGGTGTGTGGAGAATAAAGGCCCTTGAGGAAAGTGGTGGTTGGTTAGAGCGAACGACTGTTGAAGATATGGATATTGCTGTTCGTGCTCATCTTTGTGGATGGAAGTTTATATTCGTAAATGATGTTAAGTGTCTTTGTGAACTTCCAGAGACCTACGAGGCATATAAGAAACAACAACACCGGTGGCATTCAGGTCCAATGCAGTTGTTTCGTTTATGTTTTTTTGATATACTTCGTTCAAAGGTTAGTTGGGCGAAGAAGTTCAATTTGATATTTCTTTTCTTCCTCCTGAGGAAACTTATCCTGCCATTTTATTCATTCACCCTATTCTGCATAATTCTTCCATTGACCATGTTCCTTCCCGAAGCTGAGCTCCCAGCCTGGGTTGTATGTTACATTCCTGGAGCTATGTCCCTCTTAAGTGTTCTCCCAGCTCCACGTTCATTCCCATTTATAGTTCCTTACCTTCTATTTGAGAACACTATGTCAGTAACTAAGTTTAATGCCATGATATCTGGATTATTTCGCTTTGGAAGTTCTTATGAGTGGGTGGTTACAAAAAAGTTGGGAAGATCATCAGAGACAGATTTGGTTGCCTTTGAGAAAGAATCTGAACCCCTAATGCGATCTAACAGTCTCCATAGATCAAACTCAGATTCAGGCCTTGAGGAACTAAGCAAACTAGAATTGTCAAAGAAAACTGGGAAGACCAAGAGAAATCGTCTCTTCAGGAAAGAACTTTGTCTTGCATTTATTTTGTTGACTGCCTCAGTTAGAAGCTTACTATCTGCCCAAGGAATTCACTTCTACTTCCTCTTGTTTCAAGGGATAAGTTTTCTGGTTGTTGGTCTTGATTTGATCGGAGAGCAGGTAAGTTGA 2073 0.4742 MSRTPNYEFQEWWNKQREKNNNNFDPLNDAKLDHSHSASPPPFTALDVDFSSSSSSSVASKKERSRSARQLSWVCLLKCQQLAASLGWLYGGVFHLARTAHRRIADSASLRGDSSRLYRAIRVFLVVVIVLLGFELVAYFKGWHFRRPDPSDVLGMLAVAYAVWVDVRARYLSPPLQSLANLCTILFIVQTVDRVVLILGCFWIKFRRLKPVASVDYDVVGISAEDFPMVLVQIPMCNEREVYHQSIGAVCILDWPKERMLVQILDDSDEVDTQQLIKAEVHKWQQRGVRIIYRHRLLRTGYKAGNLKSAMGCDYVKDYEFVAIFDADFQPTPDFLKKTVPYFKGRDDLALVQARWAFVNKDENLLTRLQNINLSFHFEVEQQVNGIFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLCGWKFIFVNDVKCLCELPETYEAYKKQQHRWHSGPMQLFRLCFFDILRSKVSWAKKFNLIFLFFLLRKLILPFYSFTLFCIILPLTMFLPEAELPAWVVCYIPGAMSLLSVLPAPRSFPFIVPYLLFENTMSVTKFNAMISGLFRFGSSYEWVVTKKLGRSSETDLVAFEKESEPLMRSNSLHRSNSDSGLEELSKLELSKKTGKTKRNRLFRKELCLAFILLTASVRSLLSAQGIHFYFLLFQGISFLVVGLDLIGEQVS 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00599 690 MobiDBLite consensus disorder prediction 20 40 - -
Viun10g00599 690 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 221 446 IPR029044 -
Viun10g00599 690 Pfam Glycosyl transferase family group 2 322 516 IPR001173 -
Viun10g00599 690 FunFam probable xyloglucan glycosyltransferase 5 222 446 - -
Viun10g00599 690 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 162 687 - -
Viun10g00599 690 SUPERFAMILY Nucleotide-diphospho-sugar transferases 230 506 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00599 Viun-Chr10 5573003 5584654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00599 1 690 Miscellaneous Gene Families AT3G07330 72.086 0.0 1025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00599 - - gmx:100801779 1199.88