Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00596 ATGGCCTCCAACCGCCTTATCACCCTCACCCGCCGCCTCCTCCTCCTCCTCCCGCCCACCGCCCGCCCCTTCTCCGCCGCCCCATTGACCTCCTCCCACCCCTCCCCGCCCATGCTCTACGACCGCCTCGCCTCCGCCACTGTTGCCAAGCTCCGCCGCCTCGACCACCCCGACCCTCGCTTCCTCAAGCACGGCAGCCCCGTCCCCTCCAACACCGACCACACACGTGTCCTCGCCGCGCCGCAGACCCGCGTGACCACGCTCCCCAGTGGCCTTCGCGTCGCTACCGAGTCCTCCCTCGCCGCACGCACTGCCACCGTCGGCGTTTGGATCGACGCCGGGTCGCGGTTCGAGACCGAGGAAACCAACGGCACCGCGCATTTCCTCGAACACATGATCTTCAAGGGCACCGCGAAGCGCACCGTGAGGGAGCTCGAGGAGGAGATCGAGAACATGGGAGGGCATCTCAATGCGTACACCTCACGCGAACAAACCACGTACTACGCTAAGGTCATGAACAAGGATGTTCCCAAGGCTCTTGATATTCTGGCTGACATCTTGCAGAATTCGAAGTTCGATGATAATAGGATTATCCGTGAGCGTGACGTGATTCTGAGGGAAATGGAAGAGGTTGAGGGACAAATGGAAGAAGTAATCTTTGACCATTTACATGCAACTGCTTTCCAGTACAGTCCACTTGGTAGAACAATTCTTGGACCTGCTCAGAATATCAAGACAATCACTAAAGATCATCTGCAAAACTACATTCAGACACACTACACAGCTCCTAGAATGGTGGTTGCCGCATCTGGAGCTGTGAAGCATGAAGAAATTGTTGAGGAAGTAAAAACATTGTTTGCTAAGTTGTCAAGAGATCCCACCACAGCTTCTCAATTAGCTGCGAAAGAACCAGCCATTTTTACCGGTTCCGAGGTTAGAATTTTGGATGATGATATTCCCCTTGCACAATTTGCTGTAGCTTTTGAAGGGGCTGCATGGACAGATCCTGATTCCGTTGCTCTCATGGTCATGCAAGCTATGTTGGGTTCTTGGAATAAATCCACAGGAGGTGGAAAACACATGGGTTCTGCGTTGGCGCAACGAGTTGGCATTAATGAAGTTGCAGAAAGCATGATGGCCTTCAATACTAATTATAAGGATACAGGTCTCTTTGGTGTTTATGCTGTTGCTAAGAAGGATTGCTTGGATGACTTAAGCTATGCAATAATGTATGAGACAACCAAGTTGGCTTATAAGGTTTCACAAGATGATGTTATTCGAGCTCGTAATCAGTTGAAATCTTCACTCCTGCTCCACATTGATGGAACAAGTCCAGTAGCTGAAGATATTGGGCGCCAGCTACTCACCTACAACAGAAGAATCCCATTTGCAGAATTGTTTGCTAGAATTGATGCTGTTGATGCAAGCACAATAAAACGTGTCGCTAACAGATTTATTTATGACAAGGATATTGTAATTGCTGCTATGGGACCTGTTCAACGATTGCCTGATTACAACTGGTTCAGACGAAGAACCTATTGGAATCGATATTAG 1554 0.5019 MASNRLITLTRRLLLLLPPTARPFSAAPLTSSHPSPPMLYDRLASATVAKLRRLDHPDPRFLKHGSPVPSNTDHTRVLAAPQTRVTTLPSGLRVATESSLAARTATVGVWIDAGSRFETEETNGTAHFLEHMIFKGTAKRTVRELEEEIENMGGHLNAYTSREQTTYYAKVMNKDVPKALDILADILQNSKFDDNRIIRERDVILREMEEVEGQMEEVIFDHLHATAFQYSPLGRTILGPAQNIKTITKDHLQNYIQTHYTAPRMVVAASGAVKHEEIVEEVKTLFAKLSRDPTTASQLAAKEPAIFTGSEVRILDDDIPLAQFAVAFEGAAWTDPDSVALMVMQAMLGSWNKSTGGGKHMGSALAQRVGINEVAESMMAFNTNYKDTGLFGVYAVAKKDCLDDLSYAIMYETTKLAYKVSQDDVIRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYNRRIPFAELFARIDAVDASTIKRVANRFIYDKDIVIAAMGPVQRLPDYNWFRRRTYWNRY 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00596 517 FunFam Mitochondrial-processing peptidase subunit beta, mitochondrial 303 517 - -
Viun10g00596 517 Gene3D - 69 291 - -
Viun10g00596 517 SUPERFAMILY LuxS/MPP-like metallohydrolase 311 507 IPR011249 GO:0046872
Viun10g00596 517 SUPERFAMILY LuxS/MPP-like metallohydrolase 80 286 IPR011249 GO:0046872
Viun10g00596 517 Gene3D - 299 517 - -
Viun10g00596 517 Pfam Insulinase (Peptidase family M16) 93 240 IPR011765 -
Viun10g00596 517 Pfam Peptidase M16 inactive domain 247 432 IPR007863 -
Viun10g00596 517 FunFam Mitochondrial-processing peptidase subunit beta 70 291 - -
Viun10g00596 517 PANTHER METALLOPROTEASE 78 503 - -
Viun10g00596 517 Coils Coil 142 162 - -
Viun10g00596 517 ProSitePatterns Insulinase family, zinc-binding region signature. 114 137 IPR001431 GO:0004222|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00596 Viun-Chr10 5430451 5434466 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00596 K17732 - gmx:100800696 896.73