Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00428 ATGGTGGCTCAGCTTGAACACCAATTTCGGCTTGGGAGACTTTCCCTTCAAGGATTGTGGTTCTATTGTCAGCCCATGATGAGGTCAATGCAGGCATTATCCACGGTCATACAAAAGGCTTCGGTCAACAACATTTCTGGTTCAGCTGTTCTTAACTTACTGCAGAGCCAGGCAAAGGCTATGGCTGGGGACAATGCTGTGAGGTTGATGCTGGAGAAAATGACACAATGTGCAAGTAGTGCTTACATGAGCATATTAGAAAGATGGGTTTATGAAGGTGTAATAGATGATCCTTATGGTGAATTTTTCATCGCAGAGGACAAATCTCTTCAGAAGGAGAGTCTCACCCAGGATTATGAAGCTAAGTATTGGCGGCAGCGTTACAGCCTTAAAGATGGAATTCCTAGTTTCCTTGCAAATATTGCAGGGACAATTTTGACGACAGGAAAATATTTAAATGTCATGAGAGAATGTGGGCACAATGTTCAGGTCCCTCCATCAGAAAACTCAAAACTTATGAGTTTTGGATCAAATCATCATTATCTTGAATGTATTAAGGCTGCTTATAATTTTGCTAGCAGTGAACTCTTGAATCTCATTAATGATAAGTATGATCTAACGGGAAGGCTGCGGTCAATTAAACACTACCTTCTTCTAGATCAGGGAGATTTCTTAGTACATTTTATGGATATTGCACGAGATGAACTAGCGAAAAAGCCTGATGAAGTCTCGGTTGAGAAGCTGCAGTCACTACTAGACCTTGCATTGCGTACTACAGCAGCTGCAGCAGATCCTTTTCACGAAGGCTTAACCTGTGTTGTGGAAAGATCTTCTTTGCTCAGAAGGTTGGGAACATTTAATGATCTTGAAGTTAGTCAGAGAAGTTCTACTGATAATGATTTGGAGGAAACCGTTAGCATCACTGGACTTGAAACATTTTCACTAAGTTACAAGGTGCACTGGCCACTGTCTATAGTATTATCACGTAAAGCCCTCACAAAGTACCAATTAATTTTTCGATTCCTTTTCCACTGTAAACATGTTGACCGTCAGTTGTGTGGAGCATGGCAAATACATCAAGGAGTTCGTGCTCTCAATACGCGGGGAACTGCTATCTCCAGATCATCTCTTCTTTGCCGTAGTATGCTTAAATTTATTAATAGCCTTCTACACTATCTGACATTTGAGGTTATTGAACCAAACTGGCATGTAATGTATAACAGACTTCAGACAGCAAATAGCATAGATGAGGTTATACAACACCACGATTTTTTCCTTGATAAATGTTTGAGAGAATGCTTGCTTCTTTTACCTGAGCTGCTGAAGAAGGTGGAGAAGCTTAAATCCATGTGCCTGCAATATTCAGCAGCAACGCAGTGGCTTATATCATCTTCTATTGATTTAGGTGACTCAGAGGAACCTATTGATTCAGTTGGCTTGAATAAAGCCAAAAGAAAGTCAGGTCAGGTCTTGAAGTCGACCACCAAAAATGTGGCAGTCACTGATTCTGTTCTCAAATTTGAGAAAGAGTTTAACACCGAGCTTCAGAGTCTTGGATCTATCTTGAGCAATAACTCCCAGGCAGAACCATACCTGGCTCATCTTGCACAATGGATTCTTGGTGTTAAAAGTGAACAATATGGTTTATGA 1650 0.4073 MVAQLEHQFRLGRLSLQGLWFYCQPMMRSMQALSTVIQKASVNNISGSAVLNLLQSQAKAMAGDNAVRLMLEKMTQCASSAYMSILERWVYEGVIDDPYGEFFIAEDKSLQKESLTQDYEAKYWRQRYSLKDGIPSFLANIAGTILTTGKYLNVMRECGHNVQVPPSENSKLMSFGSNHHYLECIKAAYNFASSELLNLINDKYDLTGRLRSIKHYLLLDQGDFLVHFMDIARDELAKKPDEVSVEKLQSLLDLALRTTAAAADPFHEGLTCVVERSSLLRRLGTFNDLEVSQRSSTDNDLEETVSITGLETFSLSYKVHWPLSIVLSRKALTKYQLIFRFLFHCKHVDRQLCGAWQIHQGVRALNTRGTAISRSSLLCRSMLKFINSLLHYLTFEVIEPNWHVMYNRLQTANSIDEVIQHHDFFLDKCLRECLLLLPELLKKVEKLKSMCLQYSAATQWLISSSIDLGDSEEPIDSVGLNKAKRKSGQVLKSTTKNVAVTDSVLKFEKEFNTELQSLGSILSNNSQAEPYLAHLAQWILGVKSEQYGL 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00428 549 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 1 532 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Viun10g00428 549 Pfam Gamma tubulin complex component C-terminal 206 536 IPR040457 GO:0043015
Viun10g00428 549 Pfam Gamma tubulin complex component N-terminal 1 203 IPR041470 -
Viun10g00428 549 Gene3D - 206 540 IPR042241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00428 Viun-Chr10 3727211 3735583 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00428 K16569 - gmx:100795585 991.49