Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00401 ATGAGTGAAATGCAGACACCGGAGAACGGAGAGTTGAACAGAATGGAAGAAACGAAACTGTTCTGTGAGGAAACGAAAGAAGCTCAAAAAGCAGCCATGGAAAAACGGTGGAAAGATTTCAAGAAAAAGATGATGGAAAACCGTGGAATCATTCTCACGAAGTTTGACCTGTTAGGGAACACCGCGATCCACGTTGCAACTCGCTCCAACCCTGAACTGGTGAGAGAGATGATAGAAATGGTGCCTGAAGCAGAAAGGTGGCACGCTTTGTGCAAGCCGAATGGTGAGGGAAACACCGTCTTGCACGAGATCGTGTTTTCCAAAAAGGCGATGGAAATGGCTGAGGTTGTGTTCAGATTTGAAGATCAGTTGGTGCCACGAGAAATGGAGGAGAAGAAGCCATTGGTGGAGCTCAGAAACAACAGAGGAGAAACCCCTCTGTTCGTCGCTGCCATGCATGGAAAGCTCAAGATTCTCAGATATATGGCTAACCGTGTGGGCACTGTGGGCACTGTGGACAATCTTCCAAAACATTTTCGTCGATCTGACAAATATAACGCTCTTCATGCCAGTGTCATTGGCCAACATTTTCATGTTGCAATTTGGCTGCAAAGAAAAGATGAAACACTTGCTCTGGAAAGGGATGAGAAGCAATTAACAAGTCTTCAATTACTTTCGAAAATGCCACAGGTTTTTCGAAGCCATATTCACCTGGGACTTGTGAAGAGCATCATATATATATTGCTCCCTGATGAATATGACAATGATGAACAGTGTCAGTTGTTTAAACAAAAGAAGGATGAAGAAAATGGTAAAGAGGATGAGCCTAAAGTCTGCAAATCTGCCATTTCAAACATAAACTACAGCTTTTGGAAAAGCTTGGCTGCAGAGTTTGAAGGCATTGACCATATGTGGAAGGAAAAGAAAAAACATAAGTTGGCTGAACAACTAGCCAGCACTTTAGTAAAATATGACTTATCATGGCAAGTATCAAGCAATGAGTATAATAGGACATTATTGATTACAATGCCACGTGATCCTTTAAATGTGGCGAAAAGGAGAAGAGTAAGTGTACAAAAAAGGGAAGAGAGACGCAAGAACATTGAAGAAAGACCAGAACGCATAGCATTGTTCATAGCAGCTAAGACTGGAATTGTAGAAATTGTTAAAAAGTTTCTTGAAGTGTATCCTGCATCTATATATCATGTCACTAAGAATAAGCAGAACATATTGACAATGGCTGTTAAGTATCGACAGAAGAAAATCCTTAAAATAATAGAAAGAACAGGTACAATGGAATCATTGGTTGGTCAAATCACAGATAAAGAAAGAACTGTCTTGCATGAAGTTGCAAGAATGGATTACTACAAAGCAGAACACTTAGCTGGAGTGGCATTCCATTTGCAAGATGAGTTGCGTTGGTATGATACTGTGAGAAGATTCACACCTAAACATTACAACATGCACTCTGACATAGATGGACACACACCAGAAGACATGTTAGAAATTGAGCATGATGGAATGCTTAAGGAGGCACAAAAATGGTTGAAGGAAACAGCTCAATCATGTTCCACGGTCGCTATTTTGGTTGCGACAGTTGTATTTGCTGCGGCATACACCATTCCAGGTGGAACTGAAAATGGAACTCCTGTGTTCCTTCATTCAAGTGAGTTTCTCTTTTTCACAATCATGGATGTTGTGGCTCTTGCTACGTCACTTGCTTCAGTGGTGGTGTTTCTTTCCATTCTCACTTCCCCGTGTGATTTATGGGATTTTCATAAGTCTCTACCAAGAAAACTCAATTTGGGATTTGCTTTGTTGTTCTTGTCGTTGATGACAACAATGCTTGCATTCAGTGCAACCATGTTGCTCACTATTCGTTTGGAATGGAAGAATTGGACTTCCACATTGATATACAGTGCTGCTTTCTTTCCTGTCACCATTTTTGCAATCATTCAGTTTCCTGTTTATGTGATGGTTCGAAGCATCACCAAGCATCTTTGGAAGCAAGTTAAGAAGGTCTTTCCAACAAGATTGATTGAACGTTGCATGAGTCATTGTTGA 2064 0.4084 MSEMQTPENGELNRMEETKLFCEETKEAQKAAMEKRWKDFKKKMMENRGIILTKFDLLGNTAIHVATRSNPELVREMIEMVPEAERWHALCKPNGEGNTVLHEIVFSKKAMEMAEVVFRFEDQLVPREMEEKKPLVELRNNRGETPLFVAAMHGKLKILRYMANRVGTVGTVDNLPKHFRRSDKYNALHASVIGQHFHVAIWLQRKDETLALERDEKQLTSLQLLSKMPQVFRSHIHLGLVKSIIYILLPDEYDNDEQCQLFKQKKDEENGKEDEPKVCKSAISNINYSFWKSLAAEFEGIDHMWKEKKKHKLAEQLASTLVKYDLSWQVSSNEYNRTLLITMPRDPLNVAKRRRVSVQKREERRKNIEERPERIALFIAAKTGIVEIVKKFLEVYPASIYHVTKNKQNILTMAVKYRQKKILKIIERTGTMESLVGQITDKERTVLHEVARMDYYKAEHLAGVAFHLQDELRWYDTVRRFTPKHYNMHSDIDGHTPEDMLEIEHDGMLKEAQKWLKETAQSCSTVAILVATVVFAAAYTIPGGTENGTPVFLHSSEFLFFTIMDVVALATSLASVVVFLSILTSPCDLWDFHKSLPRKLNLGFALLFLSLMTTMLAFSATMLLTIRLEWKNWTSTLIYSAAFFPVTIFAIIQFPVYVMVRSITKHLWKQVKKVFPTRLIERCMSHC 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00401 687 Pfam Domain of unknown function 513 623 IPR026961 -
Viun10g00401 687 SUPERFAMILY Ankyrin repeat 42 430 IPR036770 -
Viun10g00401 687 ProSiteProfiles Ankyrin repeat profile. 142 174 IPR002110 GO:0005515
Viun10g00401 687 PANTHER CASKIN 60 664 - -
Viun10g00401 687 Gene3D - 331 483 IPR036770 -
Viun10g00401 687 SMART ANK_2a 142 171 IPR002110 GO:0005515
Viun10g00401 687 SMART ANK_2a 183 212 IPR002110 GO:0005515
Viun10g00401 687 SMART ANK_2a 406 434 IPR002110 GO:0005515
Viun10g00401 687 SMART ANK_2a 372 402 IPR002110 GO:0005515
Viun10g00401 687 SMART ANK_2a 58 86 IPR002110 GO:0005515
Viun10g00401 687 Gene3D - 2 228 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00401 Viun-Chr10 3407664 3413682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00401 376 626 Miscellaneous Gene Families AT3G09550 25.085 2.38e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00401 - - vun:114166816 1350.5