Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00399 ATGTCTTACCCCATCAAAACGATAGTCGTTTTGGTTCAAGAAAACCGTTCATTTGACCACATGTTGGGTTGGATGAAATCCCTCAACCCGGAAATCGACGGAGTCACCGGTTCGGAGTCAAACCCGATTTCCACCTCGGAGCCGGCCTCGAACCGGGTTTATTTTTCCGACCAGTCTGATTTTGTTGAACCGGACCCAGGTCACACGGTGGAGGATGTGTACGAGCAAGTTTTCGGCGAACCGTGGAACGAGTCCTCGACGACGAAGAAAGTGTCGCCGACAATGGAGGGGTTCGCCCAAAACTCGGTGAAGCAAAAGAAGGGGTCAACGGCGGAGACAGTGATGAACGGGTACAAACCGGATCTGTTACCGGTTTATCGAGAGCTGGTTAAGGAGTTTGCGGTGTGTGATCGGTGGTTTGCTTCGGTTCCCGGTCCGACCCAACCGAACCGGCTCTACGTGCACTCTGCGACGTCGCATGGGTTGACCACTCAGGACACACAGAAACTCATTGGAGGGTTGCCACAGAAGACTATATTTGATTCTTTGGACGAAAATGGGTTCAGTTTTGGAATATATTACCAATATCCACCATCCACACTTTTTTATAGAAACCTTAGGAAGGTGAAATACATAGACAACTTTCATCTGTTCGATCCAAAGTTCAAGAAGCATTGTGAAGAAGGGAAATTGCCAAACTACGTGGTGATTGAGCAAAGATATTTTGATTTGCTATCACAGCCTGCAAACGATGACCATCCATCGCATGATGTCGCAGAGGGACAAAGGTTTGTGAAAGAAGTGTATGAGACACTGAGAAGAAGTCCTCAGTGGAATGAAATATTGTTTGTGATAACGTACGATGAACATGGAGGGTTCTATGATCATGTGCCAACACCTGTGGATGGAGTTCCAAACCCAGATGACATTGCAGGTCCTCAACCATTCAACTTCCAGTTTGATAGACTTGGTGTTAGGGTTCCTACCATCATTATTTCTCCTTGGATTGAGTCAGGAAAAGTGTTGCACGAACCTTGTGGGCCATTCCCAACATCACAGTATGAACATTCATCAATACCAGCAACTGTGAAGAAAATGTTCAATCTTCCTGAGTTCTTGACAAAGCGTGATGCATGGGCTGGAACATTCGAAAATCTCTTATCTCTCACCACTCCACGTACTGATTGTCCAGTGAAATTGCCGGAGCCTATGAAACTTCGAGAGGGTGGTGCGGAAGAAGATGCAGAATTGAGTGAATTTCAAGAAGAACTGATATACATGACAGCAACTTTAAATGGGGATCATAATCATAATAAGAGTGCATACCCCAAACTAACACACAATTTAACTGTTTCAGAAGCAGTTAAATACTGTGAAACTGCATTTCAAACGTTCTTGAATCAGTGTGAGAAAGCAAAGCAAAGTAGAATCGATGGATCTCAAATTGTTCATTGTGCAAACCCACACACACCACCACAATCCAAAACTTTCTTGCACAAGATGTTGTCTTGTATTTTGTGTAAAGATTAA 1530 0.4451 MSYPIKTIVVLVQENRSFDHMLGWMKSLNPEIDGVTGSESNPISTSEPASNRVYFSDQSDFVEPDPGHTVEDVYEQVFGEPWNESSTTKKVSPTMEGFAQNSVKQKKGSTAETVMNGYKPDLLPVYRELVKEFAVCDRWFASVPGPTQPNRLYVHSATSHGLTTQDTQKLIGGLPQKTIFDSLDENGFSFGIYYQYPPSTLFYRNLRKVKYIDNFHLFDPKFKKHCEEGKLPNYVVIEQRYFDLLSQPANDDHPSHDVAEGQRFVKEVYETLRRSPQWNEILFVITYDEHGGFYDHVPTPVDGVPNPDDIAGPQPFNFQFDRLGVRVPTIIISPWIESGKVLHEPCGPFPTSQYEHSSIPATVKKMFNLPEFLTKRDAWAGTFENLLSLTTPRTDCPVKLPEPMKLREGGAEEDAELSEFQEELIYMTATLNGDHNHNKSAYPKLTHNLTVSEAVKYCETAFQTFLNQCEKAKQSRIDGSQIVHCANPHTPPQSKTFLHKMLSCILCKD 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00399 509 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 2 469 IPR007312 GO:0016788
Viun10g00399 509 FunFam Non-specific phospholipase C1 1 176 - -
Viun10g00399 509 FunFam Non-specific phospholipase C1 230 415 - -
Viun10g00399 509 SUPERFAMILY Alkaline phosphatase-like 160 346 IPR017850 -
Viun10g00399 509 Pfam Phosphoesterase family 5 370 IPR007312 GO:0016788
Viun10g00399 509 Gene3D Alkaline Phosphatase, subunit A 1 180 IPR017850 -
Viun10g00399 509 Gene3D Alkaline Phosphatase, subunit A 232 414 IPR017850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00399 Viun-Chr10 3396699 3401038 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00399 2 509 Acyl Lipid Metabolism Gene Families AT3G03530 61.321 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00399 K01114 - gmx:100789421 911.753