Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00361 ATGGACTTAAACGGTGCTATTGCGGACATAATCCCTTGGGATGGGAGTCTATCTTCAAGTGATTTTTTCCTGTCTGCTCGTACATTTTCTGAGAAGTGGAAAATGTTCAATCCTTCCTTTCCTCCATGGCAGTGGATCCCGTGTCCTAAACAGCATTTGGTTGCTTCTCATAAGGTGGAAGGATACTTGTCCATGGAGAACATGTGCCATATCAAATCAAGTGAGGAAGAAGAGAGTAATAGAAGTCTGACATGGGAAGAAGATAGCAACGATTCACAGAGAGAAGAGCCCTTTGATTGTGGCACTTTAGTATGTCCAGAGCATGAAGTAAACCACTATGATTTTCACATCGTCTACAGTTCTTCATATAGAGTTCCAGTCTTGTATTTTCGTTCATACCATAGTGATGGGCAACTATTGCCTTTCAATGAAATTGAAAAGGATCTTCCCTGTCACTCTGCAAAGTTACTATCAGAATCGAAATGGACATTTATAACTCATGAGGAACATCCACATTTGAACAGACCATGGTACAAATTACATCCATGTGGGACGAGTGAATGGATGAAGCTCCTCTACGATGGTGATTCATCTTTGAACAGAAATGGTTTTGTTATTGAACACTATCTGGTTTCCTGGTTCTCAGTCATTGGACAAGTAGTTGGTCTTAAAATTCCTTTGGAAATGCTGGATACTGTAGTTTCTAACGATTCTTAG 717 0.4017 MDLNGAIADIIPWDGSLSSSDFFLSARTFSEKWKMFNPSFPPWQWIPCPKQHLVASHKVEGYLSMENMCHIKSSEEEESNRSLTWEEDSNDSQREEPFDCGTLVCPEHEVNHYDFHIVYSSSYRVPVLYFRSYHSDGQLLPFNEIEKDLPCHSAKLLSESKWTFITHEEHPHLNRPWYKLHPCGTSEWMKLLYDGDSSLNRNGFVIEHYLVSWFSVIGQVVGLKIPLEMLDTVVSNDS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00361 238 MobiDBLite consensus disorder prediction 74 95 - -
Viun10g00361 238 Pfam Autophagocytosis associated protein, active-site domain 29 226 IPR007135 GO:0019787
Viun10g00361 238 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG10 10 231 - -
Viun10g00361 238 Gene3D - 56 224 - -
Viun10g00361 238 MobiDBLite consensus disorder prediction 74 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00361 Viun-Chr10 3037758 3041446 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00361 K17888 - gmx:100786914 421.009