Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00335 ATGGCACAAGTAAGGAACAAGCAAGTGCTTCTGAGGGACCATGTCACAGGTTTTCCAAAAGAATCTGACTTGAACATTGTCGAAAGTACCATAACATTGAAGCTTCCAGAAGCTTCCAATCGTGTCCTGCTCAAAAATCTATACTTGTCCTGTGATCCTTACATGAGGAATCTCATGAACAAACCAGAAGGACCCCCCAATAGTCGTGCCTACGTTCCTGGATCCCCATTAACAGGATACGGTGTGTCTAAAGTGTTGGAGTCTGGACACCCAGATTATAAGGAAGGTGATTTAGTGTGGGGCTTTACCAACTGGGAAGAGTATAGCGTGTTATCCTCTGCTCAAATACTTTTCAAAATTGAGCACACTGATGTTCCACTTACCTACTACACTGGAATTCTTGGTATGCCAGGAGTGACTGCATATGCAGGGCTATTTGAAGTAGGCTCTCTCCAGAAAGGAGATAAAGTTTTTGTCTCAGCTGCCTCCGGTGCAGTTGGTCAACTTGTTGGGCAATTCGCCAAACTGAATGACTGTTATGTTGTTGGAAGTGCTGGATCTAAAGAGAAGGTGGATCTACTTACTGATAAATTTGGATTTGATGGAGGTTTTAATTACAAGGAAGAGCCTGATCTTGATGCAGCTTTGAAAAGGCACTTTCCAGAAGGCATTGATGTCTACTTTGAGAATGTTGGAGGCAAGACACTTGATGCTGTACTCCTGAACATGAGACTCCACGGTCGCATACCTGTGTGTGGAATGATCTCACAGTATAATCTTACTGAACATGAAGGTGTAACAAACTTGGCACAGATCATATACAAGAGGGTTCGTTTGCAAGGCTTTAACTTCATGGATTGGGTTCACCTATATCCCAAATTCTTGGATTTTCTTCTGCCTAACATCAGAGAAGGGAAGGTTGTGTATGTGGAAGACATAGCTGAAGGTCTTGAGAATGGTCCCTCAGCTTTGGTTGGCCTTTTCAGTGGCCGCAATGTTGGAAAACAAGTGCTTGTTGTTTCTCATGAATAG 1032 0.4322 MAQVRNKQVLLRDHVTGFPKESDLNIVESTITLKLPEASNRVLLKNLYLSCDPYMRNLMNKPEGPPNSRAYVPGSPLTGYGVSKVLESGHPDYKEGDLVWGFTNWEEYSVLSSAQILFKIEHTDVPLTYYTGILGMPGVTAYAGLFEVGSLQKGDKVFVSAASGAVGQLVGQFAKLNDCYVVGSAGSKEKVDLLTDKFGFDGGFNYKEEPDLDAALKRHFPEGIDVYFENVGGKTLDAVLLNMRLHGRIPVCGMISQYNLTEHEGVTNLAQIIYKRVRLQGFNFMDWVHLYPKFLDFLLPNIREGKVVYVEDIAEGLENGPSALVGLFSGRNVGKQVLVVSHE 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00335 343 SMART PKS_ER_names_mod 42 338 IPR020843 GO:0016491
Viun10g00335 343 Pfam Zinc-binding dehydrogenase 165 298 IPR013149 -
Viun10g00335 343 CDD double_bond_reductase_like 4 340 - -
Viun10g00335 343 Gene3D - 133 309 - -
Viun10g00335 343 Gene3D - 8 338 - -
Viun10g00335 343 PANTHER PROSTAGLANDIN REDUCTASE 4 340 IPR045010 GO:0016628
Viun10g00335 343 FunFam Prostaglandin reductase 2 133 309 - -
Viun10g00335 343 SUPERFAMILY GroES-like 3 170 IPR011032 -
Viun10g00335 343 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 130 306 IPR036291 -
Viun10g00335 343 Pfam N-terminal domain of oxidoreductase 7 115 IPR041694 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00335 Viun-Chr10 2725430 2729054 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00335 K19825 - gmx:100809668 657.907