Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00330 ATGGGACAAGTCTTTGACAAGTTAGATGGTAAGGAGTGGAGGAAAAGGCAAATAAGAAGGATAACAGATCGAGTTTTTGAAAAAGTACAGAATCAAAAGGAAAGTGATAAGTTGAGTTTTGAAGATCTGTATATTGCTGTTTTACTCGTGTACAATGACATCAACAAGTATATACCTGGTCCCCATTTTGACCCTCCATCAAAAGCCAGAGTCATAGAACTCAAAGAGAAATGTGATATCAACCTTGATGGGGATATTGACCGTGAAGAATTTTTTGATTTCATTCTGCAAATGACAGCTGATACATTCACTGTTGTTAGCCAAAAACTTATTGTCACTTTGGTTGTAGCACCAACAGTTGCAGTGGCAACAAAGAAAGCCACTGAGGGTGTTCCATGTGTTGGGAAAGTGGTGAAGAAGATACCAAATTCAGTTTATGCTTCCCTTGTAACCATTGCAGCTGTGTGGTTCCAGAAAAAGGCTCAAAGTTCTTCACTTTAG 501 0.3872 MGQVFDKLDGKEWRKRQIRRITDRVFEKVQNQKESDKLSFEDLYIAVLLVYNDINKYIPGPHFDPPSKARVIELKEKCDINLDGDIDREEFFDFILQMTADTFTVVSQKLIVTLVVAPTVAVATKKATEGVPCVGKVVKKIPNSVYASLVTIAAVWFQKKAQSSSL 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00330 166 SUPERFAMILY EF-hand 24 98 IPR011992 -
Viun10g00330 166 PANTHER CALCIUM ION-BINDING PROTEIN 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00330 Viun-Chr10 2661834 2665896 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00330 1 156 EF-hand Containing Proteins AT1G64850 67.308 5.18e-77 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00330 - - gmx:100527595 273.863