Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00329 ATGTGGTTAGGCTCAAATCTCATTGGTGTTGTTCTCCCCAGTGAAACCTCCTCTATAAAACCTGACAGTTGTAGTGCTCGTGTGTACACAGGCAAGGAGTGGAGGAAAAGGCAAATTAGAAAGATAACAGACCAAGTTTTTGACCAAATACAGAATGAAGTGCAACCTGATAATTTGAGTTTTGCAGATCTCTACATTGCTATTTTACTTGTGTACAATGGTATCAACAAGTATATTCCTGGTTCCCATTGTGATCCTCCTTCAAAAGACAGAGTCAGACAAGCCATTAAGAACTGTGATGACAACAAGGATGGGCAAATTAATCGTGATGAGTTTTTCGGTTTCATCCAGCAAATGGCACCTGAAACATTCAATGTTGTTCGTAAAAAGCTTGTGGCCACATTGGTTGTTGCACCAACAGTTGCAGCAACAACAAAAAAAGCTACTGAACAAGTACCAGGTTTTGGGAAACTGGTGCAGAGGTTGCCCAAAGTAGTTTATGCTGCTCTTTTAACAATTCTAACTGTGTGGTTCCAAGAGACCAATCACAATTCTGCACTCTAG 564 0.406 MWLGSNLIGVVLPSETSSIKPDSCSARVYTGKEWRKRQIRKITDQVFDQIQNEVQPDNLSFADLYIAILLVYNGINKYIPGSHCDPPSKDRVRQAIKNCDDNKDGQINRDEFFGFIQQMAPETFNVVRKKLVATLVVAPTVAATTKKATEQVPGFGKLVQRLPKVVYAALLTILTVWFQETNHNSAL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00329 187 ProSiteProfiles EF-hand calcium-binding domain profile. 87 122 IPR002048 GO:0005509
Viun10g00329 187 PANTHER CALCIUM ION-BINDING PROTEIN 35 181 - -
Viun10g00329 187 SMART efh_1 91 119 IPR002048 GO:0005509
Viun10g00329 187 ProSitePatterns EF-hand calcium-binding domain. 100 112 IPR018247 -
Viun10g00329 187 Gene3D - 32 131 - -
Viun10g00329 187 SUPERFAMILY EF-hand 80 119 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00329 Viun-Chr10 2655672 2657929 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00329 31 177 EF-hand Containing Proteins AT1G64850 55.102 1.60e-58 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00329 - - vun:114167513 356.681