Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00327 ATGGCAGAAGTGAGGAACAAGCAAGTGGTTCTGAGGGACTATGTGGTTGGTTTTCCCAAGGAATCCGACATGAACACTGTTGAAGGAAGAATAACATTGAAGGTTCCAGAAGGTTCCAATGATGTGCTTCTCAAAAATCTCTACCTTTCTTGTGACCCTTACATGAGAGTCCTCATGAGCAAGATAAGCCATGAAGGATTTGGGAGCTACACACCTGGCTCTCCATTAACAGGATATGGAGTGTCAAAAGTTCTAGAATCTGGACACCCAGATTACAAGAAAGATGATTTAGTTTGGGGAATTACGAAATGGGAAGAATTCAGCTTAGTGCCTGCAACTCAAATACATTTCAAAATTGAGCACACCGATGTCCCTCTTTCATATTACACTGGCATTCTTGGTATGCCAGGAATGACTGCTTATGCAGGTTTCTTTGAATTAGGATCTCCCAAGAAAGGAGAGAATGTTTTTGTTTCAGCTGCTTCTGGTGCTGTTGGTCAACTTGTTGGTCAGTTTGCTAAATTGACTGGTTGCTATGTTGTTGGAAGTGCTGGAAGCAAAGAGAAGGTGGATCTTTTGAAGAATAAATTTGGATTTGATGGAGCTTTTAACTACAAAGAAGAGTCAGACCTCAATGCAACTTTGAAAAGATACTTTCCAGAAGGCATTGATATTTACTTTGAGAATGTTGGAGGCAAGACACTTGATGCAGTACTCCTTAACATGAGACTCCATGGTCGCATACCTGTTTGTGGAATGATCTCACAGTATAATCTCACACAGCCTGAAGGTGTAACAAATTTGGCAAATCTCATATTTAAGCAAATTCGAATGGAAGGTTTTACTGTTGGCAAATTCTATCACCTTTATTCCAAATTCTTGGAGTTTGTGCTACCTCATATTAGAGAAGGGAAGGTTTTGTATGTGGAAGACATTGCTGAGGGTCTTGAGAATGGCCCTGCAGCCTTGGTTGGCCTCTACACCGGTCGGAATGTTGGTAAACAAGTGGTTGTTGTTGCTCGTGAATGA 1029 0.4121 MAEVRNKQVVLRDYVVGFPKESDMNTVEGRITLKVPEGSNDVLLKNLYLSCDPYMRVLMSKISHEGFGSYTPGSPLTGYGVSKVLESGHPDYKKDDLVWGITKWEEFSLVPATQIHFKIEHTDVPLSYYTGILGMPGMTAYAGFFELGSPKKGENVFVSAASGAVGQLVGQFAKLTGCYVVGSAGSKEKVDLLKNKFGFDGAFNYKEESDLNATLKRYFPEGIDIYFENVGGKTLDAVLLNMRLHGRIPVCGMISQYNLTQPEGVTNLANLIFKQIRMEGFTVGKFYHLYSKFLEFVLPHIREGKVLYVEDIAEGLENGPAALVGLYTGRNVGKQVVVVARE 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00327 342 Pfam N-terminal domain of oxidoreductase 7 115 IPR041694 -
Viun10g00327 342 SMART PKS_ER_names_mod 22 337 IPR020843 GO:0016491
Viun10g00327 342 FunFam Prostaglandin reductase 2 132 308 - -
Viun10g00327 342 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 131 301 IPR036291 -
Viun10g00327 342 Gene3D - 8 337 - -
Viun10g00327 342 SUPERFAMILY GroES-like 4 169 IPR011032 -
Viun10g00327 342 Pfam Zinc-binding dehydrogenase 164 296 IPR013149 -
Viun10g00327 342 CDD double_bond_reductase_like 4 339 - -
Viun10g00327 342 PANTHER PROSTAGLANDIN REDUCTASE 4 339 IPR045010 GO:0016628
Viun10g00327 342 Gene3D - 132 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00327 Viun-Chr10 2649458 2652579 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00327 K19825 - gmx:100811802 613.609