Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00324 ATGGCAGAAGTGAGGAACAAACAAGTGGTTCTGAAGAACTATGTGGTTGGTTTTCCCAAAGAATCAGACATGGACATTGTCGAAGGAACCATAACATTGAAGGTTCCAGAAGATTCCTCTGATGTGCTCCTCAAAAATCTCTACCTCTCATGTGATCCCTACATGAGACTCCTCATGACCAAGGAGGAGGACCTTTCTCTCGGAGTTGTCACCTACACGCTTCACTCTCCACTGACAGGAAATGGTGTGTCTGAAGTGGTGGAATCTAGAGATCCAGATTATGAGAAAGGTGATTTAGTTTATGGAATGACTAAATGGGAAGAGTACAGTTTGATCCCCTCATCCCAAATACTTTTCAAAATTGTGCACACTGATGTTCCACTTTCCTACTACACTGGAATTCTTGGTATGCCAGGATTGACTGCTTATGGTGGTTTCTTTGATGTAAGTTCTCCCAAAAAAGGTGACAATGTTTTTGTTTCAGCTGCCGCTGGTGCTGTTGGTCAACTTGTTGGCCAATTTGCCAAGTTGAGTGGTTGTTATGTTGTTGGAAGTGCGGGAAGCAAAGAGAAGGTGGATCTGCTGAAGAATAAATTAGGATTTGATGAAGCCTTTAACTACAAGGAGGAGCCAGATCTCAATGCAGCTTTGAAAAGGTACTTTAGAGAAGGCATTGACATATACTTTGAGAATGTTGGGGGAAAGACACTTGATACAGTACTCCCAAATATGAGACTCCATGGTCGGATACCTGTTTGTGGAATGATCTCACAATACAATCTTACTCAACCAGAAGGTGTAACAAATTTGGCACATCTCATATTCAAGAGGGTTAAAATGGAAGGTTTTAATGTAAATGATTTCTGCCATTTATTTCCCAAATTCTTGGAGTTTGCCCTGCCTCTGATCAGAGAAGGGAAGGTTGTGTATGTGGAAGACATTGTTGAGGGTCTTGAGAATGCCCCTGCAGCCTTGGTTGGCCTCTATACTGGTGGCAATGTTGGTAAACAAGTGGTTGTTGTTGCTCATGAGTAA 1035 0.4222 MAEVRNKQVVLKNYVVGFPKESDMDIVEGTITLKVPEDSSDVLLKNLYLSCDPYMRLLMTKEEDLSLGVVTYTLHSPLTGNGVSEVVESRDPDYEKGDLVYGMTKWEEYSLIPSSQILFKIVHTDVPLSYYTGILGMPGLTAYGGFFDVSSPKKGDNVFVSAAAGAVGQLVGQFAKLSGCYVVGSAGSKEKVDLLKNKLGFDEAFNYKEEPDLNAALKRYFREGIDIYFENVGGKTLDTVLPNMRLHGRIPVCGMISQYNLTQPEGVTNLAHLIFKRVKMEGFNVNDFCHLFPKFLEFALPLIREGKVVYVEDIVEGLENAPAALVGLYTGGNVGKQVVVVAHE 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00324 344 CDD double_bond_reductase_like 4 341 - -
Viun10g00324 344 Gene3D - 134 310 - -
Viun10g00324 344 Pfam N-terminal domain of oxidoreductase 7 115 IPR041694 -
Viun10g00324 344 SUPERFAMILY GroES-like 4 171 IPR011032 -
Viun10g00324 344 Gene3D - 8 339 - -
Viun10g00324 344 PANTHER PROSTAGLANDIN REDUCTASE 4 341 IPR045010 GO:0016628
Viun10g00324 344 SMART PKS_ER_names_mod 42 339 IPR020843 GO:0016491
Viun10g00324 344 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 131 307 IPR036291 -
Viun10g00324 344 FunFam Prostaglandin reductase 2 134 310 - -
Viun10g00324 344 Pfam Zinc-binding dehydrogenase 166 298 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00324 Viun-Chr10 2633912 2636343 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00324 K19825 - gmx:100812880 566.614