Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00323 ATGGTTCTAAATAATGGAAGTAAAAGCCAAGATCCCATAACCAACACACTCACAGAGCTTCTAAGAATTTCAATGGCAGAAGTGAGGAACAAGAAAGTGGTTCTGAGAGACTATGTGGTCGGTTTTCCTAAGGATTCCGACATGAAAACTGTTGAAGGAAGCATCAGATTGAAGGTTCCAGAAGGTTCCAATGATGTTCTTCTCAAAAATCTGTACCTCTCTTGTGACCCTTACATGAGAATCCTGATGAACAAGGTTGAAAGCATAGATATGCATCATCACTACACTCCTTCTTCTCCATTGATAGGATATGGTGTGTCTAAAGTGATGGAATCTGGACATTCAGATTATAAGAAAGGTGATTTGGTTTGGGGAATTACCAAATGGGAAGAGTATAGCTTTATCTCCCCATCTCAAATATCTTTCAAAATTCTCCACACTCATGTCCCACTTTCCTACTACACTGGAATTCTTGGTATGCCAGGAATGACTGCTTATGTTGGTTTCTTTAAATTATGTTCTCCCAGAAAAGGAGAAAATGTTTATGTTTCAGCTGCATCTGGTGCTGTTGGTCAACTTGTTGGCCAATTTGCCAAGTTGAGTGGTTGTTATGTTGTTGGAAGTGCTGGAAGCAGAGATAAGGTGGATCTGCTGAAGAACAAATTAGGATTTGATGAGGCTTTTAACTACAAAGAAGAGTCTGACCTCAATGCAACTTTGAAAAGATACTTTCCAGAAGGCATTGATATTTACTTTGAGAATGTTGGGGGAAAGACACTTGATGCAGTACTCCCAAATATGAGACTCCATGGTCGGATACCTGTTTGTGGAATGGTTTCACAGTACAATCTTTCTCAACCAGAAGGTGTAACAAATTTGGCACATCTCATATTTAAGAGGATTAAAATGGAAGGTTTTCTTGTAACTGATTTCTACCATTTATATCCCAAATTCTTGGAGTTTGTGCTGCCTCTGATTAAAGAAGGGAAGGTTGTGTATGTGGAAGACATTGTTGAGGGTCTTGAGAATGCCCCTGCAGCCTTGGTTGGCCTCTACACTGGTCGGAATGTTGGTAAACAAGTGGTTGTTGTTGCTGATGAGTAA 1104 0.3986 MVLNNGSKSQDPITNTLTELLRISMAEVRNKKVVLRDYVVGFPKDSDMKTVEGSIRLKVPEGSNDVLLKNLYLSCDPYMRILMNKVESIDMHHHYTPSSPLIGYGVSKVMESGHSDYKKGDLVWGITKWEEYSFISPSQISFKILHTHVPLSYYTGILGMPGMTAYVGFFKLCSPRKGENVYVSAASGAVGQLVGQFAKLSGCYVVGSAGSRDKVDLLKNKLGFDEAFNYKEESDLNATLKRYFPEGIDIYFENVGGKTLDAVLPNMRLHGRIPVCGMVSQYNLSQPEGVTNLAHLIFKRIKMEGFLVTDFYHLYPKFLEFVLPLIKEGKVVYVEDIVEGLENAPAALVGLYTGRNVGKQVVVVADE 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00323 367 Pfam N-terminal domain of oxidoreductase 31 139 IPR041694 -
Viun10g00323 367 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 326 IPR036291 -
Viun10g00323 367 SUPERFAMILY GroES-like 28 194 IPR011032 -
Viun10g00323 367 CDD double_bond_reductase_like 28 364 - -
Viun10g00323 367 Gene3D - 157 333 - -
Viun10g00323 367 PANTHER PROSTAGLANDIN REDUCTASE 28 364 IPR045010 GO:0016628
Viun10g00323 367 Pfam Zinc-binding dehydrogenase 189 322 IPR013149 -
Viun10g00323 367 SUPERFAMILY GroES-like 310 362 IPR011032 -
Viun10g00323 367 FunFam Prostaglandin reductase 2 157 333 - -
Viun10g00323 367 SMART PKS_ER_names_mod 66 362 IPR020843 GO:0016491
Viun10g00323 367 Gene3D - 32 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00323 Viun-Chr10 2622706 2626013 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00323 K19825 - gmx:100811802 585.489