Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00289 ATGGCTTCAATGCCTGGAATTCTCACAGATTGGCCATGGAAACCTCTCGGAAGCTTTAAGTATGTGGTGTTGGCTCCATGGGTGGTTCATAGCACTTATTCTTTGTTGGTGAAAGATGAGAAACAAAGGGATTTGAGCACTTTTCTGATATTGCCATTTTTGGTTTGGCGAATGGTTCATAATCAGATTTGGATCACTCTCTCTCGTTACAGAACAGCCAAAGGAAATGGTAGAATTGTTGATAAAGGACTTGAATTTGATCAAGTTGATAGAGAAAGAGAATGGGATGATCAAATACTGTTCAATGGATTACTATACTACTTGGCCTGCTACACATTACGTGGTGCTTCTCATCTTCCACTTTGGAAAACCGATGGAATGGTTATGGCGATGTTGATTCACGCAGGGCCTGTGGAGTTTCTGTATTACTGGTTACACAGAGCACTTCATCACCATTTTCTGTATTCCAGATACCATTCTCACCACCACTCCTCCATCGTCACAGAACCTATAACCTCTGTGATTCATCCATTTGCAGAACACATATCATATTTTCTTCTGTTTTCGATGCCAATGTTAACCCTAGTATTCACAAACACTGCTTCTGTGGGGGCCATGGTAGTGTACGTTACTTACATTGATTTCATGAATAACATGGGTCACTCCAACTTTGAGGTTGTTCCAAAATGGCTCTTTGCCATTTTTCCTCCTCTCAAATATCTCATCTACACCTCTTCGTTTCACTCCTTGCACCATACTCAGTTCAGAACAAACTACTCCTTGTTCATGCCGCTTTATGATTTCATCTATGGCACCACAGATAAAGCTTCTGATACATTGCACGAATCTGCATTAAAACGAGAAGAAGAAACACCAGATGTTGTGCACCTTACACATCTCACAACTCCTGAATCCATTTATCATCAAAGACTTGCTTTTGCTTACTTGGCTTCTAAGCCTTACACATCAAAATGGTACCTCACTTTGATGTGGCCTCTCACAGCTTGGTCCATGGTCCTCACATGGATCTATGGTAGAACGTTCATTGTTGAGGCAAATCGTTTTCAGAAACTCAAGCTGCAAACTTGGTCAATTCCCAAGTACACTATCCAATACTTCATGCAATCGCAGAAAGTGGTTATCAACACAATGATAGAAGAAGCAATACTTGATGCAGACAGAAAAGGCATAAAAGTGTTGAGTTTAGGTCTAAGAAATCAAGAAGAAGAGTTAAACATCTATGGAGGATTATTTGTTAGCAGAAATCCAAAGTTAAAAGTTAAGGTTGTCGATGGAAGCAGTCTTGTAGTTGCTCTTCTTCTTAACACCATTCCCAAAGGAACAACTCAAGTGTTACTCAGAGGAAAACTCACTAAGGTTGCTTATGCTCTTGTCTTCTCACTGTGTCAACAAAATGTTCAGGTTGCTACATTGCATGAGGATGATTATGTGAGGCTCAAAAAGTCAATCAAAGGCTCTGAAACTAATTTGACCTTTTCCAAAAGTAGCACACAGAAGATTTGGCTGGTAGGAGATGAATTGAGTGAAGAAGAACAACTGAAGGCACCGAAAGGAACATTATTCATTCCATACACACAATTTCCACCAAAGAAATATCGCAAAGATTGCTTCTACCATTGCACCCCAGCAATGTTAGCTCCTCCTTCTGTTCAAAATATCCATTCTTGTGAGGATTGGTTGCCAAGAAGGGTAATGAGTGCATGGCGCATAGCTGGAATAGTGCACTCTCTTGAAGGGTGGAATGAACATGAATGTGGCCACACAATGAATGACATAGACAAAGTTTGGGATTCAACTCTTCAACATGGATTTCAACCTCTTCAAGTTCAAGTGAAAGAGTTAGCTAAATGTTATTAA 1878 0.4015 MASMPGILTDWPWKPLGSFKYVVLAPWVVHSTYSLLVKDEKQRDLSTFLILPFLVWRMVHNQIWITLSRYRTAKGNGRIVDKGLEFDQVDREREWDDQILFNGLLYYLACYTLRGASHLPLWKTDGMVMAMLIHAGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAEHISYFLLFSMPMLTLVFTNTASVGAMVVYVTYIDFMNNMGHSNFEVVPKWLFAIFPPLKYLIYTSSFHSLHHTQFRTNYSLFMPLYDFIYGTTDKASDTLHESALKREEETPDVVHLTHLTTPESIYHQRLAFAYLASKPYTSKWYLTLMWPLTAWSMVLTWIYGRTFIVEANRFQKLKLQTWSIPKYTIQYFMQSQKVVINTMIEEAILDADRKGIKVLSLGLRNQEEELNIYGGLFVSRNPKLKVKVVDGSSLVVALLLNTIPKGTTQVLLRGKLTKVAYALVFSLCQQNVQVATLHEDDYVRLKKSIKGSETNLTFSKSSTQKIWLVGDELSEEEQLKAPKGTLFIPYTQFPPKKYRKDCFYHCTPAMLAPPSVQNIHSCEDWLPRRVMSAWRIAGIVHSLEGWNEHECGHTMNDIDKVWDSTLQHGFQPLQVQVKELAKCY 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00289 625 Pfam Fatty acid hydroxylase 137 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
Viun10g00289 625 PANTHER STEROL DESATURASE 13 613 - -
Viun10g00289 625 Pfam WAX2 C-terminal domain 451 613 IPR021940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00289 Viun-Chr10 2330687 2340675 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00289 1 614 Lipid Metabolism Gene Families AT1G02190 58.974 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00289 K15404 - gmx:100818020 1119.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g00289 10 2330687 2340675 Viun10g00289 10 2330687 2340675 ECH