Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00287 ATGGCTTCAACACCTGGAATCCTCTCAAACTGGCCATGGAAACCTCTTGGAACATTCAAGTACCTGCTATTGGGTCCTTTTGTGATTAGAAGTTGGTATATGTTGGTGAAGGATGAGAGTGAAAGGGACATAACAGCCTTTATGATACTACCATTTTTGTTGTGGCGTGTGCTTCATAATCAAATATGGATCACTCTCTCTCGCCATCGAAATGCCAAAGGCAATGCCAGAATTCTTCACAAAGGAATTGAATTTGATCAAGTTGACAGAGAAACCAATTGGGATGACCAAATTTTGTTCAATGGGTTACTGTACTACTTGGCAAACTGTACACTCTCTGGTGCATCACGTCTTCCATTATGGAGAACAGATGGAGTGATTATGGCAATGGTGCTTCATGCAGGACCTGTTGAGTTTCTTTATTATTGGTTGCACAGAGCACTTCATCATCATTTTCTGTATTCCAGATACCATTCTCACCACCACTCTTCCATTGTCACAGAACCTATAACTTCTGTGATTCATCCATTTGCTGAACACGTATCATATTTCGTTCTGTTTGCAATTCCACTGTTAACCCCAGTCTTCACTGACACAGTGTCTTTGATCACCGTATTTGGATACGTGACTTACATTGATTTTATGAATAATATGGGTCATTGCAACTTTGAGATTGTTCCAAAGTGGCTCTTTGGCATCTTCCCCCTTCTCAAGTACTTCATGTACACCCCTTCGTTTCACTCCTTGCACCATACTCAATTTAGGACAAATTACTCTCTCTTTATGCCATTTTATGACTACATCTATGGCACCATAGACAAAAGTTCTGATCAATTACATGATTCAGCATTGAAACGACAAGAAGAAACCCCAGATGTTGTGCACTTAACACACCTCACAACACCAAAATCGATCTATCATCTAAGACTTGGATTTTCTTCCTTAGCCTCCAAACCCTACACACCCAAATGGTACCTTTTCTTCATGTGGCCTCTCACAGCTTTCTCAATGATCCTCACATGGATATATGGTCGAACATTCATTGTGGAGGAAAATCGTTTTCACAAACTCAAGTTGCAAACTTGGGCAATACCCAAGTACAATTTTCAGTATTCATTGCAATCACAAAAGTTGAGTATCAACAAAATGATAGAGAAAGCAATATTAGATGCAGACAAAAATGGTGTAAAAGTGGTGAGCCTAGGTCTTATGAATCAAGGGGAGGAGCTTAACATCTATGGAGGATTATATGTTAGCAAACATCCTAAGCTAAAAGTTAAGGTTGTTGATGGAAGCAGTCTTGTAGTTGCTGTTGTTCTTAACAGTGTTCCTAAAGGAACAACACAAGTATTACTCAGGGGCAAACTCACCAAGGTTGCTTGCACTCTTGCTTTCAAATTGTGTCACCAAGGAATCAAGGTTGCTACAATGCATCAGGATGATTATGTGAAGCTAAAGAATTTGTTCAATAGCTCTGCAACTAACTTGTCTAATTTGATCATTGAGAAAAGCTGCACCCAGAAGATTTGGTTAGTTGGAGATGAATTGACTGAAAAGGAACAATTGCATGCACCCAAAGGAACATTGTTTATTCCATACTCACAATTCCCACCAAAGAAATATCGAAAGGATTGCTCCTACCATTGCACCCCAGCAATGCTGATTCCTAGTTGCGTTGAAAATGTCCATTCTTGTGAGGATTGGTTACCAAGGAGGGTAATGAGTGCATGGCGCATAGCTGGAATAGTACATTCTTTAGAAACATGGAATGAACATGAGTGCCACTACACAATGCAAAACATAGATAAAGTTTGGCATTCAACACTTCATCATGGGTTTCAACCTCTTGCTGTATCGGGCTGTGATCATACCAGTACTAATACACTGAATTTCATCAGAACTTAA 1905 0.3969 MASTPGILSNWPWKPLGTFKYLLLGPFVIRSWYMLVKDESERDITAFMILPFLLWRVLHNQIWITLSRHRNAKGNARILHKGIEFDQVDRETNWDDQILFNGLLYYLANCTLSGASRLPLWRTDGVIMAMVLHAGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAEHVSYFVLFAIPLLTPVFTDTVSLITVFGYVTYIDFMNNMGHCNFEIVPKWLFGIFPLLKYFMYTPSFHSLHHTQFRTNYSLFMPFYDYIYGTIDKSSDQLHDSALKRQEETPDVVHLTHLTTPKSIYHLRLGFSSLASKPYTPKWYLFFMWPLTAFSMILTWIYGRTFIVEENRFHKLKLQTWAIPKYNFQYSLQSQKLSINKMIEKAILDADKNGVKVVSLGLMNQGEELNIYGGLYVSKHPKLKVKVVDGSSLVVAVVLNSVPKGTTQVLLRGKLTKVACTLAFKLCHQGIKVATMHQDDYVKLKNLFNSSATNLSNLIIEKSCTQKIWLVGDELTEKEQLHAPKGTLFIPYSQFPPKKYRKDCSYHCTPAMLIPSCVENVHSCEDWLPRRVMSAWRIAGIVHSLETWNEHECHYTMQNIDKVWHSTLHHGFQPLAVSGCDHTSTNTLNFIRT 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00287 634 PANTHER STEROL DESATURASE 19 615 - -
Viun10g00287 634 Pfam WAX2 C-terminal domain 450 615 IPR021940 -
Viun10g00287 634 Pfam Fatty acid hydroxylase 134 271 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00287 Viun-Chr10 2289622 2300030 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00287 1 619 Lipid Metabolism Gene Families AT1G02190 55.943 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00287 K15404 - gmx:100818020 1010.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g00287 10 2289622 2300030 Viun10g00287 10 2289622 2300030 ECH