Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00172 ATGCATCTATCTGTAACTTCTTCTATTCCAACACTATCCTCCAAATATGTCTTTAAATACCCTTACCATTTCTGCACAAAACACATAACTTTCTCTACCAATTCTATATACTACCTTGTGAAGCAATTAAGGGCTCATTTTCTTTTCTTTTTTTTGCTGTTTGCTGGGCAACTGATGGGTGGATTCAGTACCCCAAAACCACCTCCATCTCACCATGGAGACATATTAACTATTCTGAGCATTGATGGTGGTGGTATCAAGGGGATTCTTCCAGCAACTGTTCTTGATTACTTAGATAAGGCTCTTAAGGCTAAGGATCCAAATGCAGATTTAGCACATTACTTTGATGTGATAGGAGGAACTAGCACCGGTGGACTCATAACAGCTATGTTAGCCACCGCAAGCCCTGATGATCCTACTCGTGCTGCCTTTACACCTGCACAAATTGTAGACTTCTACAAAGAAAATGGCCCTCATGTATTCAATTCATCTAGACCTGGAAACGATCCCCAATTCGATGGGGAGTATTTACATAATTTAACTCGTGAAGTGTTGAAGGATACACGACTTAGTCAAACACTGACCAATATTGTCATCCCAACTTTCGACATCAAGAGACAAAAGCCAGTTATATTTTCAAACTACAAGGTTAAGAATGCTCCGTACTTAAATACGTTGTTGTCGGATATATGCATATCCACTTCAGCTGCACCCACTCAGCTACCACCTTACTATTTTGTGAACGATGGTGTTGAGTTCAATATGGTTGATGGTGGTGTAGCAGCTGCAAATCCGACACAAGCAAGCGTAAGTGAAGCGCTACAACACAATGAATATTTGAATATCTTGGTGGTGTCTTTGGGGACAGGAACAACAATCGATAGTGCCGGTTTTGATGCTCGATCTGTTGCCTTTTGGCCAGTACAAATTTGGACTGCAGTTGCATTGGATATGCTTAGTCATGCATCTTCATGCCTCGCTGAATTTTTTCTTGCTTCACTCATTTCAGGATTCCAAACCCTAGGATTCCAAACCCCTGGGAGTACTTACCTTCGAATTGAGGAATACAACTTGAATCCTGATTTCTCCAATGGATTTGATGTTTCAAAAGAAAACATGGACGGCCTTGAAGAGACCGGAAAACAACTGTTAAAAGAAAATGATGTAAAGATGAATTTGGATACTTTTGATCTAGAACAACTTGGGGAAACAAATGCTCAGGCTCTTGACAGGATTGCTGATATTTTGTATGGAGAAAGACAACATCGTCTGAAACGGAAATCCATGGAAAAGGGAGGAAGACCATTTATTCAAACTCCTAGGGTTCTTTCCCACAAAACTCAAGCAAATGAGGCATTCCAAAGGAACTTTTTTATTTAA 1380 0.4022 MHLSVTSSIPTLSSKYVFKYPYHFCTKHITFSTNSIYYLVKQLRAHFLFFFLLFAGQLMGGFSTPKPPPSHHGDILTILSIDGGGIKGILPATVLDYLDKALKAKDPNADLAHYFDVIGGTSTGGLITAMLATASPDDPTRAAFTPAQIVDFYKENGPHVFNSSRPGNDPQFDGEYLHNLTREVLKDTRLSQTLTNIVIPTFDIKRQKPVIFSNYKVKNAPYLNTLLSDICISTSAAPTQLPPYYFVNDGVEFNMVDGGVAAANPTQASVSEALQHNEYLNILVVSLGTGTTIDSAGFDARSVAFWPVQIWTAVALDMLSHASSCLAEFFLASLISGFQTLGFQTPGSTYLRIEEYNLNPDFSNGFDVSKENMDGLEETGKQLLKENDVKMNLDTFDLEQLGETNAQALDRIADILYGERQHRLKRKSMEKGGRPFIQTPRVLSHKTQANEAFQRNFFI 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00172 459 Gene3D Cytosolic phospholipase A2 catalytic domain 69 429 - -
Viun10g00172 459 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 79 270 IPR002641 GO:0006629
Viun10g00172 459 PANTHER XYLOSE ISOMERASE 68 424 - -
Viun10g00172 459 Pfam Patatin-like phospholipase 79 269 IPR002641 GO:0006629
Viun10g00172 459 SUPERFAMILY FabD/lysophospholipase-like 76 395 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00172 Viun-Chr10 1232095 1234504 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00172 62 432 Miscellaneous Gene Families AT2G26560 40.098 1.00e-82 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00172 - - vun:114166912 913.294