Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00153 ATGGCAAAAGCAATTGCAGCTTCTTTCTTGCTTCTGATGCTGGCTTTTCCCACTGTCTTCGCTGTTGACTATGATGTTGGTGACACGAGTGGATGGGCCTCAGGGGTTGATTACACCAATTGGGTCTCTGGCAAAACTTTCAAAGTTGGTGATAATTTGGTGTTCAAGTATGATTCGAGCCATGAAGTTGATGAGGTTAACGAGAATGGCTACAGCAGTTGCAGTTCAAGCAACCTCATCAAGAACCACAATGATGGAAACAGCAAGATTGCATTGTCTTCAACCGGAAACAGGTACTTCATATGCCCAAGGCCAGGGCACTGTGCCGGAGGAATGAAGCTTCAGATCAATGTGGTGGCCGCCAACTCCACCACCCCTTCGACCCCTTCAACACCTTCTTCTCCGCCGTCTGAGTCAGGTTCTCCTTCCACCACCAACACCACTTCACCGCCGTCAAAGCCCAACGGAGCGGTTGCAGTTTCCGGCAGCATTGGGCTTCTGGCGGCTGCTTCGGCGGTTGTTCTTGGTTTCATGGGCTAG 540 0.5074 MAKAIAASFLLLMLAFPTVFAVDYDVGDTSGWASGVDYTNWVSGKTFKVGDNLVFKYDSSHEVDEVNENGYSSCSSSNLIKNHNDGNSKIALSSTGNRYFICPRPGHCAGGMKLQINVVAANSTTPSTPSTPSSPPSESGSPSTTNTTSPPSKPNGAVAVSGSIGLLAAASAVVLGFMG 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00153 179 Pfam Plastocyanin-like domain 32 112 IPR003245 GO:0009055
Viun10g00153 179 Gene3D - 20 125 IPR008972 -
Viun10g00153 179 ProSiteProfiles Phytocyanin domain profile. 22 120 IPR003245 GO:0009055
Viun10g00153 179 PANTHER BLUE COPPER PROTEIN 19 132 IPR039391 GO:0009055
Viun10g00153 179 SUPERFAMILY Cupredoxins 21 119 IPR008972 -
Viun10g00153 179 ProSitePatterns Type-1 copper (blue) proteins signature. 96 112 IPR028871 -
Viun10g00153 179 CDD Phytocyanin 22 118 - -
Viun10g00153 179 MobiDBLite consensus disorder prediction 137 156 - -
Viun10g00153 179 MobiDBLite consensus disorder prediction 122 156 - -
Viun10g00153 179 FunFam Blue copper 20 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00153 Viun-Chr10 976846 978282 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00153 17 121 Miscellaneous Gene Families AT3G60280 51.429 1.08e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00153 - - gmx:100803164 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g00153 10 976846 978282 Viun10g00153 10 976846 978282 ECH