Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00138 ATGGGTTGCACAGCATCGAAGCTGGGCAACGAGGAAACCGTGATGCGCTGCAAGGAGCGGCATCGTTTAATGAAAGACGCTGTCTACGCGCGCCACCACCTCGCGGCAGCGCACTCCGACTACTGCCACTGCCTCCGCCTCACCGGCTCTGCACTCTACACTTTCGCCGCCGCGGAACCCCTCTCAGTCGCCGATGACACCCCTGCCGTCCTCCTTCACAAAACCACCAATAATTCCCAACCGTCACCACGTCCTCCTCCCTCCGCCGACGCCGCTTCAGCTAGCCCTAAACTCCCTCGCATAGTAACCTCCGGGGCCACGCGCCGCCGTCAACAGCCGTCGAGACTCCCTCACGTTCTCTCCGAATCGAGTCTCTGTTCCTCGCCGCGAAGCGAGTATTCGAACTTCTCAGCCGCTCAACAACAACCTGAACCCACATCTACTTCACATGCGCCACAACCTCCTCTTCCCGCCGTCACTCGCCGCCGCAAACCGCCGCCGAAGCTCCCTCACATACTCTCTGAATCGAGCCTCTTCTCCTCGCCGCGAAGCGAATACTCGAATTTCTTCGCCACCGCGCACCAAACATCCACGCCTACTTCGCAAGCATCTTCCGTTTGGAATTGGGAGAATTTCTACCCTCCTCCTTCTCCTCCAGGCTCCGATTACTTCCGCCAACGCCAAAACCACAAACCGCAAACAACGCCGAATTTCGAAACGTCGGACTCGGAATCTGAATCGATGTACAATCCGTTCCGTTCAAACTCTCAACGCAATCGCAAAATTGATAACAGTACAAACGTCGATTCACATTCACAACAACAAAAGACAGAACCAGGGATTTCCGAATCAGAAACGGAATCGGAAGAGAAATACTTACATGAACCGGTTCAGACGGAGCGCGAGGAGGTTCGTTGCAGCGAGTGGGAGGACCGGTACAATTCCTCGAGTTCGTCGGAGCAGGAGGAAAGAGGCGCTAGAGTTACCTCACCGTCTAAGACCGAGTATGTCGCCGGAGGCTATGCTCCGGCCGCGAAGAGCGAGAAGGTCAGCGATGACGTGGCGGAGGCGAAGGTAGCGGTGAGACATAGGGATTTGAAGGAGATAGTGGAAGCGGTTAGGGAAAATTTCGAGAAAGCAGCTGCGGCCGGAGATCAGTTATCGGAGATGCTCGAGGTTAGCAGAGCGCACCTTGATCGGAGTTTCAACCAACTGAGGAAAACACTTTACCATTCAAATAGTGTACTCAGCAAGCTTAGCTCGACTTGGACCTCTAAACCGCCGTTAGTGGTTAAGTACCGGCTCGACGCCGGTTCGTTGGACGGACCGGACGGTTCAAAGAGTCTCTGTTCCACTTTGGAACGCCTTTTGGCTTGGGAGAAGAAGCTGTATCAGGAAGTGAAGGCAAGAGAATGTGTGAAGATTGAGCATGAAAAGAAACTGTCAGCTCTGCAGAGTGTAGAATGCAAAGGTGGTGATGAAGCAAAGGTAGATAAGACCAAGGCTTCCATAACAAGGTTGCAGTCATTAATTGTTGTTACATCTCAAGCTGTATCCACCACCTCAGATGCCATTAATGGCCTTAGGGATGCTCATCTTGTTCCTCAGCTTCTTCACCTCTGTCGTGGAATCATGTATATGTGGAAGTCAATGCATGAGTACCATGAAATCCAAAGCAACATTGTGCAGCAAGTCCGTGGCCTTGTGAACCAGTCCTCCAAAGGTCACTCAACATCTGAATCACACAAGCAAGCAACAAGAGATCTTGAATCAGCTGTTTCAGCTTGGCACTCCAGTTTCTGCCGCCTCATAAAGTTTCAACGTGACTTCATCCTTTCTCTGCATGGCTGGCTCAAGTTGAACCTTATTCCAGTCAACAACGAAAACATCAACAATAACACTGGATCATCGTCATCTCATGTGTTCTCTTTCTGTGATGAATGGAAACTTGCCCTTGACCGTGTTCCTGACACAGTTGCTTCAGAAGCAATCAAGAGCTTCATCAACGTTGTGCATGTGATATCAGTGAAGCAATCCGAGGAGCTGAAGATCAAGAAGAGAACTGAGAGTGCCTCCAAGGAGCTTGAGAAGAAATCTTCATCTCTGAGAAGCATAGAAAGGAAGTTTTACAACTCATATTCTATGGTAGGCATTACCCCTCCTGAGTTAGATCCTGCTAATGGACAGGGCCTGGATGCAAGAGACCCTCTTGCTGAGAAGAAACTGAAACTAGCATCTTACCAGAGGCGTGTTGAAGATGAAATGGTGAGGCATTCAAAAGCTGTTGAGGTCACCAGAGCTATGACACTCAACAATCTTCAGACTGGTTTGCCTGGAGTGTTCCAGGCTATGGCAAGTTTTTCTTCATTGTTCACTGAGGCTCTTGAGTCAGTATGTAGCCATTCACATGCTATGAAGTAG 2421 0.5056 MGCTASKLGNEETVMRCKERHRLMKDAVYARHHLAAAHSDYCHCLRLTGSALYTFAAAEPLSVADDTPAVLLHKTTNNSQPSPRPPPSADAASASPKLPRIVTSGATRRRQQPSRLPHVLSESSLCSSPRSEYSNFSAAQQQPEPTSTSHAPQPPLPAVTRRRKPPPKLPHILSESSLFSSPRSEYSNFFATAHQTSTPTSQASSVWNWENFYPPPSPPGSDYFRQRQNHKPQTTPNFETSDSESESMYNPFRSNSQRNRKIDNSTNVDSHSQQQKTEPGISESETESEEKYLHEPVQTEREEVRCSEWEDRYNSSSSSEQEERGARVTSPSKTEYVAGGYAPAAKSEKVSDDVAEAKVAVRHRDLKEIVEAVRENFEKAAAAGDQLSEMLEVSRAHLDRSFNQLRKTLYHSNSVLSKLSSTWTSKPPLVVKYRLDAGSLDGPDGSKSLCSTLERLLAWEKKLYQEVKARECVKIEHEKKLSALQSVECKGGDEAKVDKTKASITRLQSLIVVTSQAVSTTSDAINGLRDAHLVPQLLHLCRGIMYMWKSMHEYHEIQSNIVQQVRGLVNQSSKGHSTSESHKQATRDLESAVSAWHSSFCRLIKFQRDFILSLHGWLKLNLIPVNNENINNNTGSSSSHVFSFCDEWKLALDRVPDTVASEAIKSFINVVHVISVKQSEELKIKKRTESASKELEKKSSSLRSIERKFYNSYSMVGITPPELDPANGQGLDARDPLAEKKLKLASYQRRVEDEMVRHSKAVEVTRAMTLNNLQTGLPGVFQAMASFSSLFTEALESVCSHSHAMK 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00138 806 MobiDBLite consensus disorder prediction 217 331 - -
Viun10g00138 806 MobiDBLite consensus disorder prediction 105 147 - -
Viun10g00138 806 MobiDBLite consensus disorder prediction 73 178 - -
Viun10g00138 806 MobiDBLite consensus disorder prediction 282 318 - -
Viun10g00138 806 MobiDBLite consensus disorder prediction 148 163 - -
Viun10g00138 806 Pfam Protein of unknown function (DUF632) 366 672 IPR006867 -
Viun10g00138 806 PANTHER UNCHARACTERIZED 1 801 - -
Viun10g00138 806 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Viun10g00138 806 MobiDBLite consensus disorder prediction 222 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00138 Viun-Chr10 847899 852775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00138 1 89 Acyl Lipid Metabolism Gene Families AT2G27090 31.633 1.79e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00138 - - gmx:100792843 1197.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g00138 10 847899 852775 Viun10g00138 10 847899 852775 ECH
Viun10g00138 10 847899 852775 Viun5g00663 5 4020877 4026297 PCT