Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00078 ATGATGCAGAGGAAAAGGGTAGGGTGGTGGTTCTTCACAAAGGCAAAGCTTAGCCTTAACAAATACCGAAACTTTTCTTCTCAACACGTCATTCTCGACAACCCCAATCACAGTCAGGTTTTGGTCGAAGGAAATGGATGCTCCAGAATGGCCATTCTCAATAGACCCTCTGCTCTCAATGCTCTCAACACCAACATGCTGGCCACGCTGCATAAATTTTATAGGAGCTGGGAAGATAACCCTGATATTGGTTTTGTGATGATGAAGGGCAGTGGCCGAGCTTTTGCAGCTGGTGGAGATATTGTTGCGCTTTACCATTTGATAAACAAAGGAAACATGGAAGCGTGTAAAGAATTTTTCAGAACAGCCTATAGTTTTATGTACCTAATAGGTACATATTTGAAGCCACATGTGGCACTTCTAAATGGCATTACCATGGGTGGTGGGGCTGGAGTTTCAATCCCTGGGACATTCCGTGCTGCAACGGACAAAACTATTTTTGCTACCCCTGAAGTTCATATTGGATTCCACCCTGATGCTGCAGCATCTTTTTACCTTTCACATTTACCTGGTCATTTAGGAGAGTACTTGGCTCTGACAGGGGAAAAGCTCAACGGAGTAGAGATGGTTACTTGTGGGCTTGCTACACACTATTCATTAAGTGCAAGGCTTCCTTTAATTGAAGAACAGCTGGGGAAATTAGTTACTGATGACCCATCTGTCATTGAAGCCACTTTAGAACATTATGGGGACCTTGTACATCCAGACAGCAGTAGCGTACTACAAAGGATTGAAATTCTAGATAAATGCTTTTGCCATGACACAGTTGAAGAGATTGTTGATGCTATGGAAAATGCAGCAAGTGAAACAAAAGATGCATGGTGCATTGCTACCCTAAATAGACTCAAAGAAGCCGCTCCATTGAGCTTGAAGGTTGCCTTGAGATCTATACGTGAAGGTAGATTTCAGACTCTTGATCAATGTTTGCTGCGTGAGTACCGTATGACTTTACAAGCAATACATGGGCAAATATCTGGGGATTTCTGTGAGGGTGTAAGGGCACGCGTGGTGGACAAGGACTTTGCACCAAAGTGGGATCCTCCAACCTTACAAAAGGTGTCTCAAGACATGGTGGATCAGTACTTCTTACCTTTGAGTGAATCTGAACCTGATCTAGAGCTGCCAACAAAAAGTCGTGAAGCATTTCTATAG 1212 0.4348 MMQRKRVGWWFFTKAKLSLNKYRNFSSQHVILDNPNHSQVLVEGNGCSRMAILNRPSALNALNTNMLATLHKFYRSWEDNPDIGFVMMKGSGRAFAAGGDIVALYHLINKGNMEACKEFFRTAYSFMYLIGTYLKPHVALLNGITMGGGAGVSIPGTFRAATDKTIFATPEVHIGFHPDAAASFYLSHLPGHLGEYLALTGEKLNGVEMVTCGLATHYSLSARLPLIEEQLGKLVTDDPSVIEATLEHYGDLVHPDSSSVLQRIEILDKCFCHDTVEEIVDAMENAASETKDAWCIATLNRLKEAAPLSLKVALRSIREGRFQTLDQCLLREYRMTLQAIHGQISGDFCEGVRARVVDKDFAPKWDPPTLQKVSQDMVDQYFLPLSESEPDLELPTKSREAFL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00078 403 FunFam Probable 3-hydroxyisobutyryl-CoA hydrolase 2 34 398 - -
Viun10g00078 403 SUPERFAMILY ClpP/crotonase 38 368 IPR029045 -
Viun10g00078 403 CDD crotonase-like 40 217 - -
Viun10g00078 403 Gene3D - 34 398 - -
Viun10g00078 403 Pfam Enoyl-CoA hydratase/isomerase 49 382 IPR045004 -
Viun10g00078 403 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 36 398 IPR032259 GO:0003860
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00078 Viun-Chr10 490678 497330 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g00078 18 403 Acyl Lipid Metabolism Gene Families AT4G31810 61.637 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00078 K05605 - gmx:100801676 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g00078 10 490678 497330 Viun10g00078 10 490678 497330 ECH