Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00055 ATGACGACTCTTCTTCATTCCTTGCCATCCATGTCCAATTTTTCCTCCAACCAGATTCGCTTTCTCCTCACCACCTTGAACGAAGTCAACTTTGACTCCGTTTTCCATCAACTCTCTCAGTTTTCTGAATTTGGAACCACTGGATGCATTTTGCTGCTTCAAACTTGCTTGGATCACTATGGTTATGCCAGAAGAGATACGAAAGACATGCAGCACGAGCCAATTCTTGGGGCAGTCATTAAATACCTCTTGGACAAACCAAACTTCAGTACAGTTTTTTCTGAGTCGATGAAGAATATGGAAATTAATGAAAGCTTTTTAGAAAACTTTTGTAATGGATTGCAGTTATCTTTATTGGAAAAGATTATCGTCAGTCTTGCGTTATCTGATTCTGAGAATTCTGAATTTAGGCTGTGTGGCAAAACCTTTTGCATGGCTCAGATCGAGGAATTATGTGCCAACCCTGGTTCTTTGAGTTTCCATGAGCAAATTCACAGTATTATCATGTTCCTAAAGCAGTCCGAGGGTCTTTCCAAGCATGTGGATTCCTTTATGCAGATATTATCACTTATGGAGTTCAAAGCCACACCACCTTTCGTCTTGACTCCATTGCTTCCTGATGAGATGCATGAGGCTGATTTTTTAAGGAATATGGAGTTGTTCCACGACTCTGGAGAAAATGATTTTGATGCTATTTTGGCAGACATACAGAAGGAAATGAACATGGGTGATATTGTGAAGGAGCTAGGGTATGGATGTACTGTTGATGTCTCACAGTGCAAGGAAATATTTTCGCTCTTCTTACCTTTAACTGAACATACACTCTCTAAATTACTTGGTGCTATTGCTTGTACCCATTATGGGCTGGAGGACAACCAAAACACATACTTAAATTTTCGTGCGGCCCATGGATACAATGTTTCTGAGTTGCCGCCATTAAACTCTTGGAATATTGATGTCTTGATTGATACAGTCAAGCATCTTGCACCTCATACCAATTGGGTAAGTGTTATTGAAAATCTTGATCATGAAGGGTTTTTCCTTCCTAGTGAAGAGGCATTCTCTTTTCTCATGTCTGTATATAAACTTGCCTGTAAGGAACCGTTTCCTCTCCATGCTGTCTGTGGGTCTGTCTGGAAGAATACTGAGGGTCAGTTGTCTTTCCTTAAATATGCAGTATCAGCACCACCGGAAATGTTTACCTTTGCACACTCTGGAAGACAGCTGGCATATGTTGATGCAATTAATGGCCACAAGATTCAAAATGGACATCCAAATCATTCATGGTTGTGTCTTGACCTTTTAGACGTTCTGTGCCAGCTAGCTGAGAAGGGTCATGCCAGTGTTGTTCGTTCAATCCTTGATTATCCCCTTAAACACTGTCCTGAAGTCTTACTTCTTGGGATGGCACATATTAATACTGCCTACAACCTCTTGCAGCAGGAAGTATCTCCAATTGTCTTTCCCTTGATTGTAAAAAGTGCTGTAGGCAGTGGGATGATTCTACACCTTTGGCATGTTAATCCTAATTTGGTCTTTAGAGGGATTATTGATTCTCAAAACAATGACGCAGACAGTATTATAAGAATCGTAGACATCTGCCAGGAGCTAAAGATTTTATCATCTGTGGTGGAAATTATTCCTTCTCATTATAGTATTAGGTTAGCAGCTGTTGCATCAAGAAAAGAATTACTTGACCTTGAGAAGTGGTTGAGTGGCAACTTAATTACATACAAGGAAACCTTTTTTGAGGAGTGTCTCAAGTTCATTAAGGATGCCCATTTTGGTGGATCGCAGAACCTTTCTGGCAAATCTTTTCATCCATCTAGTGGTGTTCTGAGTCTATATGCTGAGGCAACGGCTACTGTTTTGAAGGTTCTTAAATCTCATAATGACTTGGTTGCCACTAGACAACTTTCGGAGGAGTTGGAGAGGCTGCATATATCTATTATAGATTCAAATCCAAGGCTTCAGAATGGTGGGGCAGGCGATTCATCTACTTCTGATGGTTATGCAGATGACATTGAAGCAGAAGCAAACTCTTATTTCCATCAAATGTTCTCTGATCAGTTAACCATTAATGCAATGGTACAAATGCTAGCTAGATTCAAGGAATCTTCAGTGAAGAGGGAGAAATCAATTTTTGAATGCATGATTGCAAACTTATTCGAGGAGTATAGATTTTTTCCAAAGTATCCTGAAAGGCAACTCAAAATAGCTGCAGTTCTCTTTGGTTCTGTGATTAAGCATCAGCTTGTAACTCATCTATCCTTGGGGATTGCACTTCGTTATGTTCTTGATGCATTGCGCAAGCCTGCAGATTCAAAAATGTTTCTGTTTGGAAGTCTGGCGTTGGAGCAGTTTGTGGATCGTCTTATTGAGTGGCCTCAGTACTGCAATCATATTCTTCAAATTTCTCATCTGCGTAGTACACATTCAGAAATAGTGGCTTTCATTGAGCAGGCCCTCGCCAGGATTTCCTCTGGTCATTCAGACGGTGATGGGGCAAGTCATGCTTCTGTTATTACTAACCATCATTCTGCACAGGCTACATTAGGGCATGTAGAGCAGCTCGGTGGCTCCACCGTCATACAACCTGGGCAGCAACATTTGTCACTACAGCTTCAACAGAGACGTGAAAATCCCTTGGATGATCGTCATAAAGCTTCTGTGGGTTCATCTACTGATGTAAAACCACTGTTATCTTCTCTGGGGCAATCTTCTGTACTACCTACTGATGCTTCTAATACCAATAAGTTACATACCTCAGTCAGCACCTCGTCAATGCTATCTTCTTCTTCTCCTGGTTTTGTTCGCCCTTCCCGTGGACCTACTTCTACCAGGTTTGGATCTGCCTTGAACATTGAAACTTTGGTTGCTGCTGCTGAGAAAAGAGAAATTCCTATAGAGGCTCCAGGGTCAGAGGTTCAGGACAAGATATTATTTATTATTAATAATGTTTCTTCTACTAATATTGAAGCTAAAGCAAAGGAGTTCACTGAAATTTTGAAAGAACAGTACTATCCTTGGTTTGCACAGTATATGGTTATGAAAAGAGCAAGCATTGAGCCAAATTTCCATGACCTGTACCTGAAATTCCTGGATAAAGTTAATTCAAAGGCTTTGAACAAAGAGATTGTTCAGGCAACTTATGAAAATTGCAAGGTTCTTTTAGGATCCGAGCTCATAAAATCAAGTTCAGAGGAACGTTCTTTGCTTAAAAATTTGGGGAGCTGGCTTGGAAAATTAACAATTGGCCGGAATCAGGTTTTGAGGGCTCGAGAAATAGACCCAAAGTCTTTGATTATGGAGGCATATGAGAAGGGGCTAATGATTGCTGTTATTCCATTTACGTCAAAGGTCCTTGAACCATGCCAAAGCAGTCTTGCATACCAACCTCCTAATCCTTGGACTATGGGCATTTTGGGATTGCTTGTTGAGATTTATTCAATGCCAAACTTGAAAATGAACCTAAAGTTTGACATAGAGGTTTTATTCAAAAATCTTGGTGTTGATATGAAGGATGTCACCCCAACTTCCCTCCTGAAAGATCGAAAAAGAGAATTTGAAGGAAATCCTGATTTCTCTAATAAGGATGTGGGGGCATCTCAATCACAAATGATTACTGATATAAAATCTGGTCTTGTACCTCCAGTAAACCAACTGGAATTGCCACTTGAAGTCACCAATCCATCAAATACGGGTGCTCATCCACATATGCTGTCTCAGTATGCTGGCCCTCTTCATATGTCCTCGGGTGCATTGATGGAAGATGAAAAGGTTACACCTTTGGGATTGTCCGATCAACTTCCCTCTGCTCAAGGACTGTTACAAGCAACTCCTTCCCCAGCACCGTTTTCTCATAGCCAGATGCAACCACAGATACCTAATATTGGGACTCATGTTATTATTAATCAAAAGCTCAGTGGTTTTGGTTTGCAAATGCATTTTCAGAGAGCGGTACCCATTGCAATGGATAGAGCTATCAAAGAGATAGTGACTAGTATTGTGCAGCGTAGTGTTTCCATTGCAACACAAACTACAAAGGAGCTTGTTTTAAAGGATTATGCCATGGAATCTGATGAGACACGCATATTAAATGCAGCACACTTAATGGTAGCTAGTCTTGCTGGGAGTTTGGCTCATGTTACTTGCAAGGAGCCATTACGGGCATCCATTTCCGGTCAACTGAGGACTTCACTTCAGAACCTGAATATTGCCAATGAAATTTTGGAACAGGCTGTGCAACTTGTAACCAACGATAATCTTGATCTAGGCTGTGCTGTCATTGAACAGGCTGCTACTGATAAGGCTATAAGCACCATCGACACAGAGATTGGTCAACAACTCTCTTTGAGAAGGAAGCATCGAGAAGGTATGGGTTCTACATTTTTTGATGCAAATTTGTATCCACAAGGTTCTATGGGTGGTGTTCCAGAGCCTCTTCGCCCGAAGCCTGGCCAGTTGTCAATGTCACAACAGCGTGTCTATGAGGACTTTGTTCGGCTTCCTTGGCAAAACCAGTCTAGCCAGAGCTCACATTCTATGTCTGCTGGTGTTGCTGTTCAATCTGCCAATACTGGTCTTCCTAGTACCAATGGTTCTGTATCAGGTCAGGTTAACCCTGGTTACCCAGTGAGCACAGGATATGAAGGAGTATCTCGACCATTAGAAGATATAACAGAGTCTAATTTGGCTCCACATTTTAGTGCTTCCTCAATTCACATTAGAGCATCTGATAGTGTTTCACAGCATAGTTTGGAAAAAGAGTCTGTTGCTTCATTTCCTTCAGCAGCTTCCACCCCGGAATTGCATGCAGTTGATTCGTCTGATGTGAAAGAATCTGGAACTTCACAGCCACTAGTTACATCAGGTGCTATGGAGCGCCTTGGAAATAGTTTCTTGGAGCCTTCTCTCACTACAAGAGACGCCCTAGATAAGTACCAGATTGTCGCACAAAAGTTGGAAGCTATGGTCAGCAGCGATTCCAGGGATGCAGAAATCCAGGGTGTCATTTCCGAGGTTCCTGAGATCATACTTAGATGTGTTAGTCGAGATGAGGCAGCTTTAGCTGTGGCCCAAAAGGTTTTCAAGGGTTTATATGATAATGCATCAAACAACATCCATGTCTCTGCTCATCTTGCAATCCTGACTGCCATTCGAGATGTTTGCAAACTTGCTGTGAAGGAGCTTACTAGTTGGGTAATTTACTCAGAAGAAGAAAGGAAATATAACAAAGAAATTACTATTGGGCTTATTCGTAGTGAATTGCTAAATCTTGCCGAGTACAATGTTCATATGGCAAAACTTATTGATGGAGGAAGGAACAAGGCTGCAACGGAATTTTCCATTTCCCTTCTTCAAACCCTGGTTATCGAGGAACCTAAAGTTATTTCAGAACTTCACAATCTTGTTGATGCTCTGGCTAAGCTTGCTACAAAGCCTGGATGCCCTGAGCCACTACCACAGCTTCTTGAAATGATCAAGAATCCTGGTGCTCTATCATCTAGCAATGCTGGAAAGGAGGATAAGGCAAGACAGTCAAGAGACATTAAGGTTCCTGGTCTGCTACCTGCTAACAGGGAAGAGTTCAACAGCGTGGATTCTATAGAACCAGATCCTGCTGGGTTCCGGGAGCAGGTTTCCATTTTGTTTAAAGAATGGTATAGAATATGTGAACTTCCTGGTGCCAATGATACAGCCTCTGCCCACTTCATCTTGCAATTGCATCAGAATGGGCTGCTTAAGGGTGATGATCTTACAGACCGCTTTTTCCGGCTATTACTGGAGCTTGCTGTTGCGCATTGCTTATCCACTGAGATGATTAATTCAGGGTCACTACAATCACAACAGCTGCAGACAATGTCATTTCTTGCAATTGATATTTACGCAAAGCTTGTCTTCTCAATCTTGAAGGGATCAAACAAACCCTTTCTTCTATCCAAGATTCTGGCAGTTGCTGTCCGATTCATTATAAAAGATGCAGAGGAGAAGAAGGCATCTTTTAATCCAAGACCACTTTTCAGATTATTCATCAACTGGCTTCTAGATCTTGGTTCACTTGAGCCTGTTACTGATGGTGCAAATCTTCAGATTTTGACTGCTTTTGCCAATGCATTTCATGCATTGCAGCCCCTCAAAGTTCCTGCGTTCAGTTTTGCATGGCTTGAACTGATAAGTCACAGGAGCTTCATGCCTAAAATGTTGACTGGTAATGGTCAAAAAGGTTGGCCTTATATCCAAAGGTTGCTTGTAGACCTGTTCCAATTTATGGAGCCTTTTCTGAGGCATGCTGAACTTGGAGACCCGGTACGTGTCCTCTACAAAGGGACACTAAGGGTGCTCTTGGTGCTACTTCATGACTTCCCCGAGTTTCTATGTGATTATCACTTTACCTTTTGTGATGTTATTCCTCCAAGCTGCATTCAGATGAGGAATATCATTTTAAGTGCATTTCCACGGAGTATGAGGCTGCCCGATCCATCTACTCCTAATTTGAAGATCGATTTACTCCAGGAAATTACCCAATCACCCCGCATTCTTTCAGAGGTTGATGCTGCACTTAAAGCAAAGCAGATGAAGGCTGATGTAGATGAATACCTTAAGACAAGGCAACAGGGTTCTCCATTTTTGTCTGATCTGAAGGATAAGATGCTTCTCGCACCCAATGAAGCTGCCTCTGCTGGGACTCGATACAATGTGCCCTTAATCAACTCACTTGTGCTATATGTTGGAATGCAGGCAATCCATCAGCTTCAGGGACGAACTCCCCATACACAATCTTCAGCAAATGCTTTCCCCTTAGCCGTATTTTCTGTTGGTGCTGCATTGGATATTTTTCAGACACTTATTGTGGACTTGGACACTGAAGGCCGTTACCTCTTCCTAAATGCCATTGCCAACCAATTACGTTATCCTAATACCAACACACACTACTTTTCCTTCATCCTTCTTTACTTGTTTGCTGAATCAAACCAGGAAGTTATCCAAGAACAAATTACCAGAGTCTTGTTGGAACGCCTAATTGTTAACCGTCCTCATCCCTGGGGTCTCCTCATTACCTTTATTGAACTCATCAAGAATCCTAGGTACAACTTCTGGAACCGGAGTTTCATCAGATGTGCCCCGGAGATTGAAAAACTTTTTGAATCTGTGTCAAGATCTTGTGGGGGTCCAAAACCAGTGGATGATAACATGGTCTCCGGTTGGGTCTGA 7215 0.419 MTTLLHSLPSMSNFSSNQIRFLLTTLNEVNFDSVFHQLSQFSEFGTTGCILLLQTCLDHYGYARRDTKDMQHEPILGAVIKYLLDKPNFSTVFSESMKNMEINESFLENFCNGLQLSLLEKIIVSLALSDSENSEFRLCGKTFCMAQIEELCANPGSLSFHEQIHSIIMFLKQSEGLSKHVDSFMQILSLMEFKATPPFVLTPLLPDEMHEADFLRNMELFHDSGENDFDAILADIQKEMNMGDIVKELGYGCTVDVSQCKEIFSLFLPLTEHTLSKLLGAIACTHYGLEDNQNTYLNFRAAHGYNVSELPPLNSWNIDVLIDTVKHLAPHTNWVSVIENLDHEGFFLPSEEAFSFLMSVYKLACKEPFPLHAVCGSVWKNTEGQLSFLKYAVSAPPEMFTFAHSGRQLAYVDAINGHKIQNGHPNHSWLCLDLLDVLCQLAEKGHASVVRSILDYPLKHCPEVLLLGMAHINTAYNLLQQEVSPIVFPLIVKSAVGSGMILHLWHVNPNLVFRGIIDSQNNDADSIIRIVDICQELKILSSVVEIIPSHYSIRLAAVASRKELLDLEKWLSGNLITYKETFFEECLKFIKDAHFGGSQNLSGKSFHPSSGVLSLYAEATATVLKVLKSHNDLVATRQLSEELERLHISIIDSNPRLQNGGAGDSSTSDGYADDIEAEANSYFHQMFSDQLTINAMVQMLARFKESSVKREKSIFECMIANLFEEYRFFPKYPERQLKIAAVLFGSVIKHQLVTHLSLGIALRYVLDALRKPADSKMFLFGSLALEQFVDRLIEWPQYCNHILQISHLRSTHSEIVAFIEQALARISSGHSDGDGASHASVITNHHSAQATLGHVEQLGGSTVIQPGQQHLSLQLQQRRENPLDDRHKASVGSSTDVKPLLSSLGQSSVLPTDASNTNKLHTSVSTSSMLSSSSPGFVRPSRGPTSTRFGSALNIETLVAAAEKREIPIEAPGSEVQDKILFIINNVSSTNIEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIMEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMGILGLLVEIYSMPNLKMNLKFDIEVLFKNLGVDMKDVTPTSLLKDRKREFEGNPDFSNKDVGASQSQMITDIKSGLVPPVNQLELPLEVTNPSNTGAHPHMLSQYAGPLHMSSGALMEDEKVTPLGLSDQLPSAQGLLQATPSPAPFSHSQMQPQIPNIGTHVIINQKLSGFGLQMHFQRAVPIAMDRAIKEIVTSIVQRSVSIATQTTKELVLKDYAMESDETRILNAAHLMVASLAGSLAHVTCKEPLRASISGQLRTSLQNLNIANEILEQAVQLVTNDNLDLGCAVIEQAATDKAISTIDTEIGQQLSLRRKHREGMGSTFFDANLYPQGSMGGVPEPLRPKPGQLSMSQQRVYEDFVRLPWQNQSSQSSHSMSAGVAVQSANTGLPSTNGSVSGQVNPGYPVSTGYEGVSRPLEDITESNLAPHFSASSIHIRASDSVSQHSLEKESVASFPSAASTPELHAVDSSDVKESGTSQPLVTSGAMERLGNSFLEPSLTTRDALDKYQIVAQKLEAMVSSDSRDAEIQGVISEVPEIILRCVSRDEAALAVAQKVFKGLYDNASNNIHVSAHLAILTAIRDVCKLAVKELTSWVIYSEEERKYNKEITIGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFSISLLQTLVIEEPKVISELHNLVDALAKLATKPGCPEPLPQLLEMIKNPGALSSSNAGKEDKARQSRDIKVPGLLPANREEFNSVDSIEPDPAGFREQVSILFKEWYRICELPGANDTASAHFILQLHQNGLLKGDDLTDRFFRLLLELAVAHCLSTEMINSGSLQSQQLQTMSFLAIDIYAKLVFSILKGSNKPFLLSKILAVAVRFIIKDAEEKKASFNPRPLFRLFINWLLDLGSLEPVTDGANLQILTAFANAFHALQPLKVPAFSFAWLELISHRSFMPKMLTGNGQKGWPYIQRLLVDLFQFMEPFLRHAELGDPVRVLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRSMRLPDPSTPNLKIDLLQEITQSPRILSEVDAALKAKQMKADVDEYLKTRQQGSPFLSDLKDKMLLAPNEAASAGTRYNVPLINSLVLYVGMQAIHQLQGRTPHTQSSANAFPLAVFSVGAALDIFQTLIVDLDTEGRYLFLNAIANQLRYPNTNTHYFSFILLYLFAESNQEVIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLFESVSRSCGGPKPVDDNMVSGWV 2404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00055 2404 MobiDBLite consensus disorder prediction 1585 1623 - -
Viun10g00055 2404 Gene3D - 943 1190 - -
Viun10g00055 2404 FunFam CCR4-NOT transcription complex subunit 1 2155 2384 - -
Viun10g00055 2404 Coils Coil 1401 1421 - -
Viun10g00055 2404 Gene3D - 1866 2154 - -
Viun10g00055 2404 FunFam Ccr4-Not transcription complex subunit 942 1190 - -
Viun10g00055 2404 FunFam Transcription regulator 1866 2158 - -
Viun10g00055 2404 MobiDBLite consensus disorder prediction 869 945 - -
Viun10g00055 2404 CDD NOT1_connector 1638 1829 - -
Viun10g00055 2404 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX 35 2393 IPR040398 GO:0017148|GO:0030015
Viun10g00055 2404 FunFam Transcription regulator 662 829 - -
Viun10g00055 2404 Pfam CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819 1315 1457 IPR024557 -
Viun10g00055 2404 Gene3D - 2155 2384 - -
Viun10g00055 2404 MobiDBLite consensus disorder prediction 895 945 - -
Viun10g00055 2404 Pfam CCR4-NOT transcription complex subunit 1 CAF1-binding domain 969 1188 IPR032191 -
Viun10g00055 2404 Gene3D - 663 828 IPR038535 -
Viun10g00055 2404 Pfam CCR4-Not complex component, Not1 2016 2385 IPR007196 -
Viun10g00055 2404 Pfam CCR4-NOT transcription complex subunit 1 TTP binding domain 658 825 IPR032193 -
Viun10g00055 2404 Pfam CCR4-NOT transcription complex subunit 1 HEAT repeat 485 628 IPR032194 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00055 Viun-Chr10 298112 319915 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00055 K12604 - gmx:100783935 4427.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g00055 10 298112 319915 Viun10g00055 10 298112 319915 ECH