Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00045 ATGGAGCCTTCACTCATACTATCTTCACCTTCATCATCCACCCCTTTACCTTTCTTCATCTCAAACACTCTTCCTTTCCATGCAAAACCCAATCTTTCCGTCAAACTCAATTGCACCCTGCAAAAGTCCCAGTTTTGGGGAAGAAATTTGAGTTGGGGCCCATCACAATCGCCGCATGGAAGACCGAAATTTGATGCGGCGAGGCCCATAATAACAGCGGTGGTGAAGAGAAGGAAAGAGCTTCCATTTGACAACGTGATTCAGAGGGACAAGAAGCTGAAATTCGTTCTGAGGGTGAGGAATATTCTGGTGGCTCAACCAGATAGGGTTATGTCGCTTAAGCAGCTTGGGAAGTTCAAAAGAGATTTGGGTCTCGATAAAAGGAGGAAACTTATCGCCATATTGAAGAAATTCCCAGCAGTGTTTCAGATTATGGAAGAAGGGGTTTACTCTCTCAAATTCAAAATGACCCCTGAAGCCGAGAGACTCTATTTTGAGGAATTGAGGATTAGGAATGAGATGGAAGAGTTGGTGATTGTAAAACTCAGGAAGTTGTTGATGATGTCACTGGAAAAGAGGATTTTGTTGGAGAAAATTGCACATCTGAGGACAGATCTTGGTCTCCCCCAGGGATTTCGTGACACCATTTGTCATAGGTATCCTCAGTACTTCAAGGTGGTTGCAACTGAGCGTGGCCCTGCCTTGGAGCTAACTCATTGGGACCCTGAGCTTGCGGTTTCAGCGGCTGAGCTATCGGCTGAGGATAATCGGATAAGGGAAATGGAGGAGCAGAATTTGATCATAGACAGACCTCCCAGGTTCCACAGGGTGAAGCTTCCAAAGGGTCTTAATCTTTCCAAGGGTGAGATGAGGAGGATCATGCAATTCAGAGACTTGCCTTATATTTCGCCTTACTCTGATTTCTCTGAATTGAGGCCAGGGACAAGGGAGAAGGAGAAGCATGCTTGTGGAGTTGTTCATGAGATTCTGAGTCTCACACTTGAGAAGAGGACACTTGTTGATCACTTCACGCATTTTCGTGAGGAGTTCAGATTCTCTCAGCAGCTGAGGGGGATGTTGATAAGGCATCCTGATATGTTTTATGTCTCTCTGAAAGGAGATAGAGATTCTGTGTTTCTGAGGGAAGCTTACCGGGACTCTCAGTTGGTGGACAAGGACCGGTTGTTGCTTGTAAAGGAAAAGCTTCGTGTCCTGGTTAATGTTCCGCGATTCCCCAAGGGACCTGCTCGCAAGACCCTTGAAGATAGCTTGAGAGAAGGTGATGATGGCAGAGAATATGAAAGTGATCAAGGGGAAGAAGCATGGTCAGAAGAAGTTGATGATTTAGTGAGTGATGAAGCATTTGAGGATGTTGTTGATGACTGGAGCGATGAAGACGATGACAGTTTGCCACCAGATTTTGATGATGATGATGATGAAGTATTGGAGATTGGACAGGGAAAGGCAAATAAACAAGTTAAATACACCAGACAGAATGATGAAGAAGAAGCCCTTCTTCCTGTATTCTCCGATGGCCGTCCCAGAGAACAATGGTGA 1557 0.4534 MEPSLILSSPSSSTPLPFFISNTLPFHAKPNLSVKLNCTLQKSQFWGRNLSWGPSQSPHGRPKFDAARPIITAVVKRRKELPFDNVIQRDKKLKFVLRVRNILVAQPDRVMSLKQLGKFKRDLGLDKRRKLIAILKKFPAVFQIMEEGVYSLKFKMTPEAERLYFEELRIRNEMEELVIVKLRKLLMMSLEKRILLEKIAHLRTDLGLPQGFRDTICHRYPQYFKVVATERGPALELTHWDPELAVSAAELSAEDNRIREMEEQNLIIDRPPRFHRVKLPKGLNLSKGEMRRIMQFRDLPYISPYSDFSELRPGTREKEKHACGVVHEILSLTLEKRTLVDHFTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAYRDSQLVDKDRLLLVKEKLRVLVNVPRFPKGPARKTLEDSLREGDDGREYESDQGEEAWSEEVDDLVSDEAFEDVVDDWSDEDDDSLPPDFDDDDDEVLEIGQGKANKQVKYTRQNDEEEALLPVFSDGRPREQW 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00045 518 MobiDBLite consensus disorder prediction 485 518 - -
Viun10g00045 518 Pfam Plant organelle RNA recognition domain 79 407 IPR021099 GO:0003723
Viun10g00045 518 Coils Coil 244 264 - -
Viun10g00045 518 MobiDBLite consensus disorder prediction 461 480 - -
Viun10g00045 518 MobiDBLite consensus disorder prediction 416 432 - -
Viun10g00045 518 MobiDBLite consensus disorder prediction 416 446 - -
Viun10g00045 518 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 70 436 IPR045040 GO:0003723
Viun10g00045 518 MobiDBLite consensus disorder prediction 494 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00045 Viun-Chr10 265740 267680 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00045 - - gmx:100810556 819.305