Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01833 ATGTCCACTCTGCAACTTCACTCCGCTCCCACTTCTTCCTCTTCGTTCGCTCCGATCACCACTTCTCGCTTCTTCCAAACCTCTCGCGTCTCGCTCCGAAACGCCGTCCGCTGCAAGGCGATAGAAGCAGTGCAATTGGAGAACGGGAGGCCGAGCGCCAGCGAGTTCGTCGTCAGCGGAAACGCGATTCCGAGCTACGTCGTGGCGCCGAACGCGCGGATTCGTGATTTGGTTCACCGGAGCGACACGCGTCTGAGAATATTCTCCGGCACCGCCAATCCCGCGCTTTCTCAGGAAATTGCGTGCTACCTGGGTCTGGAGCTTGGAAAAATTAAGATAAAGCGTTTTGCTGATGGCGAGATATATGTTCAGCTCCAAGAGAGTGTCAGGGGGTGTGATGTGTTTCTTGTGCAGCCCACATGTCCTCCTGCAAATGAGAATCTTATGGAGCTTCTCATAATGATTGATGCTTGCAGGAGAGCTTCAGCAAAAAATATTACTGCTACTCAAGGGCGTGAATCCATTGCTGCAAAGCTTGTAGCAAATTTAATTACAGAAGCGGGTGCAAATCGTGTACTTGCTTGTGATCTTCATTCTGGGCAGTCCATGGGTTATTTTGATATTCCAGTTGATCATGTATATGGACAGCCTGTCATACTTGATTACCTTGCCAGCAAAACTATCTGTTCAGACGATTTGGTAGTTGTCTCACCAGATGTTGGTGGCGTTGCCAGAGCACGTGCTTTTGCCAAAAAATTATCTGATGCTCCCTTAGCTATTGTTGATAAAAGGCGTCATGGGCATAATGTTGCGGAGGTGATGAATTTGATAGGTGATGTAAGGGGAAAGGTAGCAGTTATGGTAGATGACATGATTGATACTGCTGGGACTATTGCCAAAGGGGCAGCTCTGTTGCATCAAGAAGGGGCAAGGGAAGTCTACGCATGCACCACGCATGCTGTTTTCAGTCCTCCTGCTATAGAGAGGTTATCAAGCGGTTTGTTTCAAGAAGTTATCATAACTAACACAATTCCAGTGGCAGAACAAAACTATTTCCCCCAATTAACTGTCCTGTCGGTGGCAAACCTTCTGGGCGAGACTGTTTGGCGAGTTCATGATGATTGCTCAATTGTATTGATAATCGCATGTCGGTGGGTGGAATTGAACCTTATTCAAGTTTGGGCATTGATTGAACAATTTGTATCATTGAAATCCAAATCGTGCACAATTTTTAAACGGGTAGATGTAGAGGAGGACGTAGAAGAGGAGTGTGGTGATGAGACTAGGCAACAACTAGAAGTGGCAAAGAAAGAAGTTTTCCATGTGCGGAAGAAACTATTTTCAGAGAGAAAAAATGGTTTGATTTTGCTTTGTGTTGTAGTACTATGTTGGGCAATAATAATATGGTTGTGTAATGTGCAGCCCAAATCACTTTGA 1437 0.4593 MSTLQLHSAPTSSSSFAPITTSRFFQTSRVSLRNAVRCKAIEAVQLENGRPSASEFVVSGNAIPSYVVAPNARIRDLVHRSDTRLRIFSGTANPALSQEIACYLGLELGKIKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLIMIDACRRASAKNITATQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLASKTICSDDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVRGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACTTHAVFSPPAIERLSSGLFQEVIITNTIPVAEQNYFPQLTVLSVANLLGETVWRVHDDCSIVLIIACRWVELNLIQVWALIEQFVSLKSKSCTIFKRVDVEEDVEEECGDETRQQLEVAKKEVFHVRKKLFSERKNGLILLCVVVLCWAIIIWLCNVQPKSL 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01833 478 CDD PRTases_typeI 231 343 IPR000836 -
Vimu9g01833 478 ProSitePatterns Phosphoribosyl pyrophosphate synthase signature. 196 211 IPR000842 GO:0000287|GO:0004749|GO:0009156|GO:0044249
Vimu9g01833 478 SUPERFAMILY PRTase-like 92 169 IPR029057 -
Vimu9g01833 478 PANTHER RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER 84 378 IPR005946 GO:0000287|GO:0004749|GO:0009165
Vimu9g01833 478 SMART Pribosyltran_N_2 85 188 - -
Vimu9g01833 478 SUPERFAMILY PRTase-like 150 373 IPR029057 -
Vimu9g01833 478 FunFam Ribose-phosphate pyrophosphokinase 215 358 - -
Vimu9g01833 478 Pfam Phosphoribosyl synthetase-associated domain 273 377 IPR005946 GO:0000287|GO:0004749|GO:0009165
Vimu9g01833 478 Gene3D - 215 358 IPR029057 -
Vimu9g01833 478 Pfam N-terminal domain of ribose phosphate pyrophosphokinase 85 188 IPR029099 -
Vimu9g01833 478 Gene3D - 88 373 IPR029057 -
Vimu9g01833 478 NCBIfam ribose-phosphate diphosphokinase 86 379 IPR005946 GO:0000287|GO:0004749|GO:0009165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01833 Vimu-Chr9 27789130 27799474 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01833 K00948 - gmx:100816430 676.396