Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01817 ATGTTTTTCCTTGATTGCGCAATGTTGGATGCAAATGGAAGCCTCACAGAGAAAAATCCTACAGTTGTTTTTGTCTTAGGTGGCCCAGGCAGTGGAAAGGGTACGCAATGTGCAAATATTGTTGACAATTTTCAGTATACTCACCTCAGTGCAGGGGATCTTCTGCGAGCAGAAATCAAATCTGGTTCTGAGAATGGTACAATGATTCAGAATATGATTAAAGAAGGGAAAATTGTTCCCTCTGAGGTAACAATTAAGCTCTTACAAAAAGCAATGAAGGAAAGTGGCAATGACAAATTTCTGATTGATGGTTTTCCCCGCAATGAGGAAAATCGTGCAGCATTTGAGAAAGTGACAGGAATAGAGCCAGCTTTTGTCCTATTTTTTGATTGCCCTGAGGAAGAGATGGAGAGGCGACTTCTTAGTAGGAACCAGGGTCGAGAAGATGACAATATTGAAACAATAAGGAAGCGGTTCAAGGTGTTCTTGGAGTCTAGTCTTCCGGTGATTAATTATTATGACGCAAAAGGAAAAGTTCGCAAGATCAACGCTGCGAGATCTGTTGAAGAGGTATTTGAGACAGTGAAAGGAATTTTTGGTCCGAAGAATGAGAAGGTAAATCATTATGTTCGTCTTATGTCAAGACTTTATATGTATAAGTTCCATTTTGTATCAAAGACAAAATTTGGGAACCATTGTCTTCCTTGTTAA 711 0.3938 MFFLDCAMLDANGSLTEKNPTVVFVLGGPGSGKGTQCANIVDNFQYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMKESGNDKFLIDGFPRNEENRAAFEKVTGIEPAFVLFFDCPEEEMERRLLSRNQGREDDNIETIRKRFKVFLESSLPVINYYDAKGKVRKINAARSVEEVFETVKGIFGPKNEKVNHYVRLMSRLYMYKFHFVSKTKFGNHCLPC 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01817 236 Hamap Adenylate kinase [adk]. 21 200 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu9g01817 236 ProSitePatterns Adenylate kinase signature. 100 111 IPR033690 -
Vimu9g01817 236 Gene3D - 9 199 IPR027417 -
Vimu9g01817 236 FunFam Adenylate kinase 1 14 202 - -
Vimu9g01817 236 Hamap UMP-CMP kinase [CMPK1]. 20 202 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Vimu9g01817 236 PRINTS Adenylate kinase signature 24 37 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu9g01817 236 PRINTS Adenylate kinase signature 52 66 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu9g01817 236 PRINTS Adenylate kinase signature 164 178 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu9g01817 236 PRINTS Adenylate kinase signature 147 162 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu9g01817 236 PRINTS Adenylate kinase signature 100 116 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu9g01817 236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 199 IPR027417 -
Vimu9g01817 236 CDD ADK 22 191 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu9g01817 236 Pfam Adenylate kinase 25 177 - -
Vimu9g01817 236 PANTHER NUCLEOTIDE KINASE 16 196 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vimu9g01817 236 NCBIfam UMP-CMP kinase family 22 199 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01817 Vimu-Chr9 27488881 27491381 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01817 K13800 - gmx:100500111 378.637