Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01811 ATGGCGATGTTGTTGAAGCACGCGAGGGCGTCGTCGTCGCTGCTGAAGCAGCACGTGACCCGCGCGCACCTGCTTTCTCGGCCGTTCACCACGACCGAGGGCCACCGTCCCTCCATCGTCCACAAACGCAGCCTCGACATCCTCCACGATCCTTGGTTCAATAAATCTGTTTTTATGTGCTGGACTGATGAATTTTGCTATGGAGTTTTTGCATCACCTTTTCTTCCTTTTGGAACAGCTTTTTCCATGACAGAACGAGACCGTCTTGATCTACGTGGACTGCTTCCCCCAAATGTCATGTCTCCTGACCTACAGATTGAACGCTTCATGGTTGATTTGAAGAGGCTTGAAGTTCAAGCAAGAGATGGGCCTTCTGATCCTAATGCATTGGCCAAGTGGCGGATACTTAATCGCTTGCATGACAGGAATGAGACTATGTACTATAAGGTTTTGATTGCCAAAATAGAGGAATATGCACCTGTAGTGTACACTCCAACAGTGGGCCTTGTATGCCAGAACTATAGTGGACTATTTAGAAGACCGAGAGGAATGTATTTCAGTGCCGAGGATCGTGGTGAAATGATGTCTATGGTGTATAACTGGCCAGCTGAGCAGGTTGATATGATTGTAGTAACTGATGGGAGCAGAATCCTGGGACTTGGAGATCTTGGAGTTCAAGGAATCGGAATTGCCATTGGGAAGCTTGATCTATATGTTGCTGCTGCTGGGATAAATCCTCAAAGGGTACTTCCTGTGATGATTGATGTTGGTACTAACAATGAGAAGTTACTTGAAGATCCCTTATATCTGGGATTGCAGCAACATCGTCTTGATGGTGATGACTATCTGGCTGTTGTTGATGAATTTATGGAGGCTGTCTTTACTCGCTGGCCAAATGTAATTGTGCAGCACAGTTTGAAGATTTCCAAAGCAAATGGGCATTTAAGTTATTACAGAGGTACAGAAGTACCTACAGAATGTTCAATGATGATGTACAGGGCACAAGGAAGACCAATGATTGACTTTCCAAAGCAAAAGATTGTTGTTGCTGGTGCTGGAAGTGCTGGAATTGGGGTTCTTAATGCAGCCAGAAAAACAATGGCAAGAATGTTGGGTAATAATGAAGTAGCTTTTAACAGTGCCAAAAGTCAGTTTTGGGTTGTTGATGCAAAGGGATTAATCTCTGAAGGACGTGAAAATATTGATCCAGATGCCCTTCCTTTTGCAAGAAATTTGAAAGAAATGGAGCGCCAAGGACTGAGAGAAGGAGCAAGCCTTGAGGAAGTGGTCAAGCAAGTGAAGCCCGATGTCCTCCTAGGATTATCAGCTGTTGGAGGATTGTTTTCAAAGGAGGATTCAACATCAACGAGACCAGCTATATTTGCTATGTCGAATCCTACAAAGAATGCTGAATGCACTGCTGAAGAAGCATTCTCCATTTTGGGTGACAACATTATTTTTGCAAGTGGAAGTCCATTCAGTAATGTGGATCTTGGAAATGGTCATATTGGCCACTGCAACCAGGGAAACAACATGTACCTCTTTCCGGGCATTGGTCTCGGAACTCTTCTGTCAGGTGCTAGGATAATCTCTGATGGCATGCTACAAGCTGCGGCTGAGCGGTCTTTACTTGATTTTGACTCTTTTTTTGCCCTGCCTAATATCATTGGAAACCGAAGTCTGGCTACATATATGAGTGAAGAGGAGGTGCTCAAAGGGATTATTTTCCCTTCAACATCCAGAATTCGAGATATTACAGAGAAGGTAGCCGCAGCTGTTATAAAAGAAGCGTTGGAGGAGGACCTAGCTGAAGGATATCATGGAATGGATGCTAGGGAGCTAAAGAAACTTAGCGAGGGTCCAGACAGCACTGTTAACTGTTGGTCAGATTAG 1893 0.4464 MAMLLKHARASSSLLKQHVTRAHLLSRPFTTTEGHRPSIVHKRSLDILHDPWFNKSVFMCWTDEFCYGVFASPFLPFGTAFSMTERDRLDLRGLLPPNVMSPDLQIERFMVDLKRLEVQARDGPSDPNALAKWRILNRLHDRNETMYYKVLIAKIEEYAPVVYTPTVGLVCQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVQGIGIAIGKLDLYVAAAGINPQRVLPVMIDVGTNNEKLLEDPLYLGLQQHRLDGDDYLAVVDEFMEAVFTRWPNVIVQHSLKISKANGHLSYYRGTEVPTECSMMMYRAQGRPMIDFPKQKIVVAGAGSAGIGVLNAARKTMARMLGNNEVAFNSAKSQFWVVDAKGLISEGRENIDPDALPFARNLKEMERQGLREGASLEEVVKQVKPDVLLGLSAVGGLFSKEDSTSTRPAIFAMSNPTKNAECTAEEAFSILGDNIIFASGSPFSNVDLGNGHIGHCNQGNNMYLFPGIGLGTLLSGARIISDGMLQAAAERSLLDFDSFFALPNIIGNRSLATYMSEEEVLKGIIFPSTSRIRDITEKVAAAVIKEALEEDLAEGYHGMDARELKKLSEGPDSTVNCWSD 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01811 630 Pfam Malic enzyme, NAD binding domain 333 540 IPR012302 GO:0051287
Vimu9g01811 630 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 66 304 IPR046346 -
Vimu9g01811 630 Gene3D - 66 323 IPR037062 GO:0004471
Vimu9g01811 630 Pfam Malic enzyme, N-terminal domain 140 303 IPR012301 GO:0004471
Vimu9g01811 630 Gene3D - 328 620 - -
Vimu9g01811 630 SMART Malic_M_2 334 598 IPR012302 GO:0051287
Vimu9g01811 630 PRINTS Malic enzyme signature 455 471 IPR001891 GO:0004470|GO:0004471
Vimu9g01811 630 PRINTS Malic enzyme signature 242 264 IPR001891 GO:0004470|GO:0004471
Vimu9g01811 630 PRINTS Malic enzyme signature 146 170 IPR001891 GO:0004470|GO:0004471
Vimu9g01811 630 PRINTS Malic enzyme signature 206 235 IPR001891 GO:0004470|GO:0004471
Vimu9g01811 630 FunFam Malic enzyme 65 323 - -
Vimu9g01811 630 PIRSF ME 9 322 IPR001891 GO:0004470|GO:0004471
Vimu9g01811 630 PIRSF ME 554 624 IPR001891 GO:0004470|GO:0004471
Vimu9g01811 630 PIRSF ME 328 544 IPR001891 GO:0004470|GO:0004471
Vimu9g01811 630 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 340 607 IPR036291 -
Vimu9g01811 630 PANTHER MALIC ENZYME-RELATED 28 608 - -
Vimu9g01811 630 SMART malic_2 140 319 IPR012301 GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01811 Vimu-Chr9 27424364 27454262 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01811 K00028 - gmx:100799344 997.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g01811 9 27424364 27454262 Vimu9g01811 9 27424364 27454262 ECH