Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01800 ATGGGAACAGCAAGTGAGTCAGATTTTGGTTATGTTCTGAGTGAAAGAAAAGCATTTGATGAAACAAAAGCTGGTGTCAAAGGGCTTGTTGATGCAGGTTACAAGAAGGTTCCTAGCATATTCCGTCATCCTCCTCAGAAATCTGAGAAGAAGGTCTCAAATTCAACTGACACAAGCCATGTTATTCCAGTCATAGACCTTGCAGATATTCACAAGGATGCAAGCAAACGCCAAGGGCTTGTTGGCATAGTGATCAATCATGACATCCCTGTGAGTGTTCTTGAGGAGATGCAAAATGGGGTCAAAAGGTTTCATGAACTTGATGCTGAACACAAAAGGGAATTCTATTCACGAGATAGAACAAAACCCTTTTTTTATAACAGCAATTTTGATCTATATGGCTCACAGCCAGCACTCAATTGGAGGGACACTTTTAAGTGTTTGTTGTACCCTGATGCCCCCAAACCAGAAGAAATTCCTGCAGTATGCAGAGACATACTGCTGGATTACAGTAAATACATAATGAAGCTTGGTATTTTACTGCTTGAGTTGTTTTCAGAAGCTTTGGATCTGAGTCCAAACTATCTCAAAGATATTGGATGTGCTGGGAGAGTGTTTGGTCTTTGCCATTATTATCCTGCATGTCCTGAACCTGATTTGACCATGGGAACCACCTTGCATTCTGACAATGATTTCTTCACAATCCTTCTCCAGGATCATATTGGTGGTCTCCAAATAAGATACAATGACAAGTGGATTGATATAAACCCTGTACCTGGTGCTTTGGTGGTTAATATTGGAGACTTTTTGCAGGCAAGTTTTCTGTTATCCTCCTGTTTCTTCTTTATTTCCTGCAACTTTTACCTATCATGGATACTACTTACATGTAAGGCTTCATTTTTCTAA 906 0.3996 MGTASESDFGYVLSERKAFDETKAGVKGLVDAGYKKVPSIFRHPPQKSEKKVSNSTDTSHVIPVIDLADIHKDASKRQGLVGIVINHDIPVSVLEEMQNGVKRFHELDAEHKREFYSRDRTKPFFYNSNFDLYGSQPALNWRDTFKCLLYPDAPKPEEIPAVCRDILLDYSKYIMKLGILLLELFSEALDLSPNYLKDIGCAGRVFGLCHYYPACPEPDLTMGTTLHSDNDFFTILLQDHIGGLQIRYNDKWIDINPVPGALVVNIGDFLQASFLLSSCFFFISCNFYLSWILLTCKASFF 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01800 301 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 201 301 IPR005123 -
Vimu9g01800 301 Gene3D - 17 285 IPR027443 -
Vimu9g01800 301 Pfam 2OG-Fe(II) oxygenase superfamily 209 286 IPR044861 -
Vimu9g01800 301 SUPERFAMILY Clavaminate synthase-like 23 272 - -
Vimu9g01800 301 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 55 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01800 Vimu-Chr9 27242843 27246721 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01800 15 271 Glycosyltransferase AT5G59530 50.923 1.63e-94 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01800 - - vun:114166835 480.33