Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01795 ATGAATGAAAGAAATAGTGGGCAGGGAAATACTGTGAGATTTTTCTGTGCGTGTAAAAGAATAGAAGCGGTTTGTGCAAATCCACCTGCGATGCTTGAGGACAAGAATGTGGAAAGTAAAAGGTGGTATTTGGGTGGTCCACATATTGACTTCATAACTAAAGTGCATAGCTTTGGACATCTAATGGCATCATCGGATGAAGAGGGTGAAATTATCCCAGTTGTTACTAATTATTGGTTTGAAAATGAAAAGGAGGATTTTGTGTCACTTTGTAGTTTGACATTGTTGTTTAGCATTAGTGAGATCGAATGTGACTTGGGAGAAAAAGTATTTTTGCGTGGCACAACCGATGATAGCCTGCAGAAAATTTACAAACAGATCACAGGATGGAGATTTGAACTTACCTATGAGCAGCCTGAGATTTCAGTGCTTTCAAAGGACAGAAATTGGATAACACTCCAAAGACCAAGGAAGTGTTTTGAAAGTATAATTAGGACAATCTTGGTCACTGTATATTTTTTACATTTTCTGAGACGGAATCCAGAGGATTCTCAAATATCTATTTGGGACAAAATGAAGAAGGCCTTTAGCGCATTTGATATCATACCATCTGAGAATGATATTCTAAATCATGTGAGTTTGATGAGAGAAGCTGTTAAAAGGGACAAAGATTTAGCAAAATCAAAGCCTTTGTGTGAAGTGATTACCATTTATTTGAAAGGCATAATAGAAGGTTGTTTTGGTTCTAGTGCTGCCAAGTTAACTCCTTTGATTTTGTGCAATCCCAGGATGTTCATCCTACAATGCAACCAAAATTTATTGTGGACTCAGGATGAGGAGAATGTACAATTTGATGAACTGAATCTCGTTGGAGAGCAAAATATTGGATATGATACTGTTTGTTCAATTTGTGATAATGGTGGTGAAATACTTCCTTGTGAAGGAAGTTGTTTGAGATCCTTCCATGCAACTAAAGAGGCTGGTATAGATGCATTTTGTGAATCTCTTGGCTACACCACTTCTGAAGTTAAGGCCTTTCCAAACTTTTACTGTCAAAATTGTAAATATAAGCAGCATCAATGCTTCGCATGTGGCAAATTGGGTTCATCTGATGTATCATCTAAAGCTGAGGTATTTCCTTGTGTTACTGCAAATTGCGGTCTCTACTACCATCCTGACTGTGTATCAAGGCTTCTCTGCCCTGGCATTGACACCGAACAAGAGGAAATGAGAAAGAAAGTTGCCTTTGGCAAAGCATTTGTCTGTCCTCTTCATACATGCTCTTTATGCAAAAAGGGTGAAGTTAAAAATGTTAATCATTTGCAGTTAGCAATATGTAGACGCTGTCCTAAAGCTTACCACAGAAAATGTTTACCCAAGGAAATTTCTTTCACACTTGATTATGATAAGGGCATTGAGCAGAGGGCTTGGGATGGTTTACTTGATCATCGAATTTTGATATATTGCATGGACCATGAGATGGATAGCAAACTTGGGACTCCTGCAAGAGATCATCTGGTATTTCCTGATATAAAAGTCAAAAGCAAGGTATTAAATTACAAATTATTTGACAAAGGAAAGGATACTATAAATTTGGATAAAAATTTTGAAGATCTTCCTCCAAACTGGGTGGCAAAGCAGAGTGCTAGCTTTCGAGAAGGGGATGTTGCCAAAGATGTGGACAAAATATATTGCAAGAAAAATAGTGCATCAGTCAAGTTTGATTGGTATAGAAAATATTTGAAGGTCAAAAATATGCCTGTGTCAAATCATTCCTCTCCAAGTCCTTCAAAAAAGCTACCTTTAAAGGGTGCTAACTTGTCGTGTAATTCAAGATTATGTGAAGCTAAATCTCTGCAGAAAAATTTGGTCTGTGCAAGAACTGAAAAAACTGGCTTTGAGAAGCCTCTGGTAAACAAAATCCGAACATCTCTTGACTTTGATAATGCTGAAATGGAAAACAGTGTATTGTCTTTAGTGAAAGAATCCATGTCTACATTTAATGAGCAAGAATTCATTAAGAACCATCAAGCCTTCTCTTCAACATCAGGTTTAACCGAAACTGAATTTCATAAGAACCTTACACAAGGGAAAGTAGAAGGGTCAATTAAGGCTGTTCAAACAGCTTTGCAGAGGTTAGAAGAAGGATGTAGTATTGAAGAAGCAAAAGCTATTTGTGACCCAGTGGTGCTCCATCAGCTTTTCATTTGGCAGAAGCAGATCAAGGTCTATCTTGCACCTTTTCTTCACGGCATGCGATATACTTCCTTTGGTCGCCATTTCACTAAAATAGACAAACTGAAGGAGGTTGTTAATAGGCTTCATTGGTACGTTCAGAATGGAGACACGGTTTTGGACTTCTGTTGTGGTTCTAATGACTTCAGTTGTCTAATGAAATCAAAGCTTGAACAGATGGGGAAGTCATGTTCATTCAAGAACTATGATTTATTCCAACCCAAGAATGATTTCAACTTTGAAAAGAGAGATTGGATGAGTGTCAATGCAGAAGAATTACCCCACGGTTCTAAACTTATCATAGGGCTGAATCCTCCTTTTGGGGTGAAGGGTTGTCTTGCTAACAAATTTATTAACAAGGCATTGACTTTCAATCCGAAACTTCTTATTCTAATTGTACCAAAAGTAACTAAAAGACTTGACAAAAGGAAAGGTGGATATGATTTAATTTGGGAGAGTGATGAGATGTTTACAGGAAAGTCATTTTATCTTCCTGGTTCTGTTGATGTACGAGACAAGCAATTGGAAGACTGGAACTTGAAGCCACCACCTCTCTACCTTTGGAGTCACCCTGATTGGACCAGTTTGCACAGGAAAATTGCTCAAGAACATGGCCACATGAAGGAGGAATATGATGAGCATGTGAAGAATTATCTTATGGAGGAGAATCATGACTGTTATCAGGACTATTCTGGATTACATGCACCTGGGGATGTTTTGAGCATATTTGATGATATTCCATGTGATGATAATGATGTTGCAGATGAGGAAGTTGCAACATGCAATCCTCAGGGTCAGGTGAAGGGAACACTGTTTTCTGATTGTGGAGGAGCAATGGAATTGGAGAATAGGTTACCCTTTGATGAAGCTGAGGAAATGTGCATTGACATGGAGTTATCAACTCCCTAG 3144 0.3814 MNERNSGQGNTVRFFCACKRIEAVCANPPAMLEDKNVESKRWYLGGPHIDFITKVHSFGHLMASSDEEGEIIPVVTNYWFENEKEDFVSLCSLTLLFSISEIECDLGEKVFLRGTTDDSLQKIYKQITGWRFELTYEQPEISVLSKDRNWITLQRPRKCFESIIRTILVTVYFLHFLRRNPEDSQISIWDKMKKAFSAFDIIPSENDILNHVSLMREAVKRDKDLAKSKPLCEVITIYLKGIIEGCFGSSAAKLTPLILCNPRMFILQCNQNLLWTQDEENVQFDELNLVGEQNIGYDTVCSICDNGGEILPCEGSCLRSFHATKEAGIDAFCESLGYTTSEVKAFPNFYCQNCKYKQHQCFACGKLGSSDVSSKAEVFPCVTANCGLYYHPDCVSRLLCPGIDTEQEEMRKKVAFGKAFVCPLHTCSLCKKGEVKNVNHLQLAICRRCPKAYHRKCLPKEISFTLDYDKGIEQRAWDGLLDHRILIYCMDHEMDSKLGTPARDHLVFPDIKVKSKVLNYKLFDKGKDTINLDKNFEDLPPNWVAKQSASFREGDVAKDVDKIYCKKNSASVKFDWYRKYLKVKNMPVSNHSSPSPSKKLPLKGANLSCNSRLCEAKSLQKNLVCARTEKTGFEKPLVNKIRTSLDFDNAEMENSVLSLVKESMSTFNEQEFIKNHQAFSSTSGLTETEFHKNLTQGKVEGSIKAVQTALQRLEEGCSIEEAKAICDPVVLHQLFIWQKQIKVYLAPFLHGMRYTSFGRHFTKIDKLKEVVNRLHWYVQNGDTVLDFCCGSNDFSCLMKSKLEQMGKSCSFKNYDLFQPKNDFNFEKRDWMSVNAEELPHGSKLIIGLNPPFGVKGCLANKFINKALTFNPKLLILIVPKVTKRLDKRKGGYDLIWESDEMFTGKSFYLPGSVDVRDKQLEDWNLKPPPLYLWSHPDWTSLHRKIAQEHGHMKEEYDEHVKNYLMEENHDCYQDYSGLHAPGDVLSIFDDIPCDDNDVADEEVATCNPQGQVKGTLFSDCGGAMELENRLPFDEAEEMCIDMELSTP 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01795 1047 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 357 447 IPR013083 -
Vimu9g01795 1047 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 73 967 - -
Vimu9g01795 1047 CDD PHD2_NSD 360 425 - -
Vimu9g01795 1047 SMART PHD_3 360 426 IPR001965 -
Vimu9g01795 1047 SMART PHD_3 427 493 IPR001965 -
Vimu9g01795 1047 SMART PHD_3 300 355 IPR001965 -
Vimu9g01795 1047 Pfam Cytosine specific DNA methyltransferase replication foci domain 97 193 IPR022702 -
Vimu9g01795 1047 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 297 356 IPR013083 -
Vimu9g01795 1047 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 754 860 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01795 Vimu-Chr9 27171648 27182657 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01795 - - cam:101512524 1240.33