Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01774 ATGCATCATAAGAAATCCGAACTTCAGATCGGAAAAGAAAGCACCGGCGTCTCTTCCGATTTCAACCCTATCCGCCACCACCCCAACCACCACCACCACCACCACCACCCTATCCCCAACCTAAACCTCCAAACCCAAACCTCAACAGTCCCTTATAAAAGACCCTCCCTCTGCAAATCCCCAACCCTCAACAGATTTCCAAAACCGCGCCGCGCCACCGCTCCCTCCGCCACCACCGCCACCTGGGTATCCTCCGTCGTCTCCCTCCGCTTCCGCCTACGCCTCTTCATCTTCTTCTCCCTCCCCTTCTTCTACTTCCTTGTATCTCATCCTACAAACTCCTTCATCCTTGATTTCCTCGCCGCGTTCTTCTTTTCCGCCGCGCTCTTCTTCTCGCTCAGCCTCGCCCTGCCGCGAATCCCCTCCATCCGCTTCTTCCTCAAGCCCGAGGCCCGGCCCGCGCTGAGGCTACCCGTGTTCTGGGCCCGCCCGGCCCGGCCCGAGTTTCAATTCTGCGTGGTTGCGTACCCGAACGGCGACGTTTACGAGGGGGAGTTCAGAAGAGGGAAGTGTTGTGGGAGTGGGGTTTACTACTACAGCATGAGTGGGAGGTATGAGGGGGATTGGGTGGAGGGGAAGTACGATGGGTTTGGGGTGGAGACGTGGGCTAAGGGGAGTAGGTACCGGGGGCAGTACCGCCAGGGTCTTCGGCACGGGTTCGGGGTGTACCGGTTTTACACCGGCGATGTTTATGCCGGGGAGTGGGCCAGTGGGCAGAGTCATGGCTGTGGGGTGCACACATGCGAGGATGGCAGCAGGTACGTGGGGGAGTTCAAGTGGGGCGTTAAGCATGGCCTTGGACACTATCATTTTAGGTTTGTGGATTATGGGAATTTCTTACTTATGGACCATGTTTTGGTGGCCGTGTTATCTTTTATTGATCGTGTACTAATTGAATACCTCTTTTGTTTTCGATTTGTTGTGTGTATATCTAAAGCTTTTGAGTTACTTTGGCAAGATGTTGGTCTTGATTTGGCATCTGAAATTTACTTGGCTCGGTTGTGTACCTATCGAAATGGGGATACATATGCTGGTGAATACTTTGCGGATAAGATGCATGGATATGGGGTATATAGTTTTGCAAATGGCCATTGTTATGAAGGATCCTGGCATGAAGGCAAAAGGCAGGGAATTGGAATGTATGCATTTAGAAATGGAGAAACCCAGTCTGGTCACTGGCAAAATGGAGTCATTGACACTCCCAGCTCACAGAGTGCCACCTATCCTGTTTCTCCTGTTGGTGTCAATCATTCCAGAGTACTAAATGCAGTGCAGTTTTTTTATTACCGAATCTACAAACTTGTTGGTAATGGTTTCTTTGGCTGTGTTTCTGTCTCCAAGGAAGCAAGAAGAGCAGCTAAGAAGGCCTATGATGTGGCCAAGGTAGATGAAAGGGTGAATAGAGCTGTAGCAGCAGCTAACAGAGCAGCCAATGCAGCTAGAGTAGCTTCTGTCAAGGCTGTGCAAAATCAAATGCATCATAATGTCAACAGCAAGAGCATTCCAATCCCCATTGTGTGA 1581 0.5104 MHHKKSELQIGKESTGVSSDFNPIRHHPNHHHHHHHPIPNLNLQTQTSTVPYKRPSLCKSPTLNRFPKPRRATAPSATTATWVSSVVSLRFRLRLFIFFSLPFFYFLVSHPTNSFILDFLAAFFFSAALFFSLSLALPRIPSIRFFLKPEARPALRLPVFWARPARPEFQFCVVAYPNGDVYEGEFRRGKCCGSGVYYYSMSGRYEGDWVEGKYDGFGVETWAKGSRYRGQYRQGLRHGFGVYRFYTGDVYAGEWASGQSHGCGVHTCEDGSRYVGEFKWGVKHGLGHYHFRFVDYGNFLLMDHVLVAVLSFIDRVLIEYLFCFRFVVCISKAFELLWQDVGLDLASEIYLARLCTYRNGDTYAGEYFADKMHGYGVYSFANGHCYEGSWHEGKRQGIGMYAFRNGETQSGHWQNGVIDTPSSQSATYPVSPVGVNHSRVLNAVQFFYYRIYKLVGNGFFGCVSVSKEARRAAKKAYDVAKVDERVNRAVAAANRAANAARVASVKAVQNQMHHNVNSKSIPIPIV 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01774 526 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 211 256 - -
Vimu9g01774 526 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 176 291 - -
Vimu9g01774 526 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 355 420 - -
Vimu9g01774 526 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 257 297 - -
Vimu9g01774 526 Gene3D - 354 433 - -
Vimu9g01774 526 Gene3D - 257 296 - -
Vimu9g01774 526 Gene3D - 170 211 - -
Vimu9g01774 526 Gene3D - 212 256 - -
Vimu9g01774 526 Pfam MORN repeat 182 202 IPR003409 -
Vimu9g01774 526 Pfam MORN repeat 386 407 IPR003409 -
Vimu9g01774 526 Pfam MORN repeat 228 250 IPR003409 -
Vimu9g01774 526 Pfam MORN repeat 251 273 IPR003409 -
Vimu9g01774 526 Pfam MORN repeat 205 227 IPR003409 -
Vimu9g01774 526 Pfam MORN repeat 274 291 IPR003409 -
Vimu9g01774 526 Pfam MORN repeat 363 384 IPR003409 -
Vimu9g01774 526 ProSitePatterns Protein kinases ATP-binding region signature. 455 475 IPR017441 GO:0005524
Vimu9g01774 526 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 172 436 - -
Vimu9g01774 526 SMART morn 226 247 IPR003409 -
Vimu9g01774 526 SMART morn 361 382 IPR003409 -
Vimu9g01774 526 SMART morn 249 270 IPR003409 -
Vimu9g01774 526 SMART morn 180 201 IPR003409 -
Vimu9g01774 526 SMART morn 384 405 IPR003409 -
Vimu9g01774 526 SMART morn 272 293 IPR003409 -
Vimu9g01774 526 SMART morn 203 224 IPR003409 -
Vimu9g01774 526 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01774 Vimu-Chr9 26933954 26939247 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01774 175 419 Acyl Lipid Metabolism Gene Families AT1G60890 28.571 7.98e-21 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01774 - - mesc:110615502 536.184