Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01741 ATGGCTCCTTTTCTTTTTCTTTTTCTGCTGTTTTCTTCTCAGTTGGTCAGTGGAATCAACACAAAGCTTCCATCTCCATCCTATGGTAACCTTATTACCATTCTCAGCATAGATGGAGGTGGTATCAGAGGTCTCATTCCTGCTGTAGTTCTTAATCACTTGGAAAAATCTCTTCAGGCATGGGATAAAAATGCATTGCTAGCAGATTACTTTGATGTGATAGCAGGGACTAGCACAGGAGGACTCATGACTGCTCTGCTAACTGCACCTAACCCACAGCACCCCACTCGTCCCAAGTATGATGGCAAGTTCTTGCAAAACTTAGCAAGTGAATTACTGCAAAACACACGACTCAGCGAAACACTGACAAATGTTGTGATTCCAACCTTCGACCTTAAGAAGCTTCACCCAGTTATCTTCTCAAACTTTCAGCTTAAGGATGTTCCTAGCTTTGATGCAAAGCTGTCTGATATATGCATTGGAACCTCAGCTGCACCAACTTATCTACCACCTTATTACTTCAAAAATGGCGACACTGAATTCAATTTGATTGATGGTGGAGTTGCAGCAACTAATCCGGCTATGGCTGCTTTGACAGAAGTGATAAAGCAACAGAAGGAGAAGAATCCTTACATGACTCGTAAGAATTCAAAGGAAAACATCAATATCTTGTTGCTGTCTATAGGTTGTGGAACTGCAGAAGCTGTTGGTGTTGATGCCCAAGTTGCAGAACACTTCTCAGCAAATCAATGGGCAGCAACAGGCCTTGCAACTGGTGCTTATGATTATGGTTCCAAAGAAATGACCGAGTTTTACATTTCCACTGTCTTTCCTGGCCTCCAATCTTCAGACTACTACCTTCGAATTCAGGAATATAACTTGGATCCATCCATGGATGCCCTTGACAATGCCACTGCTGTGAACTTGAAAAATCTTGAAAAGGTTGGCTATAACCTTCTGAATGAACCAGTTTTGAGAAAGAACGTTGCTACTTTTGTCCCAGAGGAAGAAGAAGAATGGGGTACAAATGCTCAAGCTCTTAAAAGGTTGGCTGAGGTTCTGTACACAGAGAAAAAGCTTCGCAATGAGAGAAAGAAATCAATGGAGAAAATGGGACGTCCATTTATTAAGAATGTTGTTGGAGAAACAAGTTATTAG 1158 0.4162 MAPFLFLFLLFSSQLVSGINTKLPSPSYGNLITILSIDGGGIRGLIPAVVLNHLEKSLQAWDKNALLADYFDVIAGTSTGGLMTALLTAPNPQHPTRPKYDGKFLQNLASELLQNTRLSETLTNVVIPTFDLKKLHPVIFSNFQLKDVPSFDAKLSDICIGTSAAPTYLPPYYFKNGDTEFNLIDGGVAATNPAMAALTEVIKQQKEKNPYMTRKNSKENINILLLSIGCGTAEAVGVDAQVAEHFSANQWAATGLATGAYDYGSKEMTEFYISTVFPGLQSSDYYLRIQEYNLDPSMDALDNATAVNLKNLEKVGYNLLNEPVLRKNVATFVPEEEEEWGTNAQALKRLAEVLYTEKKLRNERKKSMEKMGRPFIKNVVGETSY 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01741 385 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 35 198 IPR002641 GO:0006629
Vimu9g01741 385 Pfam Patatin-like phospholipase 35 113 IPR002641 GO:0006629
Vimu9g01741 385 SUPERFAMILY FabD/lysophospholipase-like 31 332 IPR016035 -
Vimu9g01741 385 Gene3D Cytosolic phospholipase A2 catalytic domain 24 367 - -
Vimu9g01741 385 PANTHER XYLOSE ISOMERASE 20 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01741 Vimu-Chr9 26649132 26654502 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01741 23 364 Miscellaneous Gene Families AT2G26560 44.444 5.97e-89 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01741 - - var:108346793 655.981