Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01736 ATGGCTCATTTGGTTTTCTTTGTTTTGCTGTTTGTTGGGCAACTGATTGGTGGATTCAGTGTCCAGAAACTGAGTCCATCTGACAATAGAGACACGTTAACTCTTCTGAGCATTGATGGTGGCGGAATCAAGGGGATTATTCCAGCAACAGTTCTTGATTACTTAGATAAGGCTCTTAAGGCTAAGGATCCAAATGCAGATTTAGCACATTATTTTGAAGTGATAGGAGGGTCTGGCACTGGTGGACTCATAGCAGCTATGTTAGCCACCCCAAGCCCTGATGATGCTTCTCGTGCTGCCTTTACTCCTGCACAAATTTTAGACTTCTACAAACAAAATGGCCCTCATATATTCAATTTATCCAGACCTGGAAATGGTCCCAAGTTCGACGGGGAGTTTTTACATAACATAACTCGTGAACTGTTGAAGGATACTCGACTTAGTCAAACACTTACCAATGTTGTAATCCCAACTTTCGACCTCAAGAGACAAAAACCAGTCATATTCTCAAAGTACAAGCTTGAGAATGTTCCCTACTTAAATGCCTTGTTGTCAGATATATGCATATCGACTTCAGCTATACCCACTCAGCTACCACCTTACTATTTTCAGAACGATGGTGTTGAGTTCAATCTGATTGATGGTGCTGTAGCAGCTCAGAATCCGACACATGTAACCGTAAGTGAAGTGCTACAACATGCAGAGTATCCGAAAATCTTGGTCTTGTCTTTGGGGACTGGACATACAAAATATGTGGAGAGTAATTCTTTCGATGCTCGCGTAGCTGCCTTTTGGACAGAAGATATATGGGCTGCTATTGCAACCGATATGCAGGGTCGTGCTTCTTCAGCCATGGCTAAATACTATCCTGCTTCACTCTTTTCAAGATTCCCACCTTCTATGAGTACATACCTTCGAATTGATGAATACGACTTGAATCCTGATTTCTCAAACTCAGTTAATGTTACACAAGAAAACTTGGAAGGCCTGGAGAAGACTGGAAAACAACTGTTACAAGAAAAAGTTGTGAAGATGAATTTGGACACTTTTAATATAGAAGAAGGGGTGGAAACAAATGCTGAGGCTCTTGACAGGATTGCTGATATTTTGCATGGAGAAAGACAACGTCGTCTGGGAAGCAAATCTATGAGAAAAGGAGGAAGGCCATTTCTTGAAACTCTTGCTCAAGCAAATTGGGCATTCCAAAAGAACATACATATTTAA 1224 0.4118 MAHLVFFVLLFVGQLIGGFSVQKLSPSDNRDTLTLLSIDGGGIKGIIPATVLDYLDKALKAKDPNADLAHYFEVIGGSGTGGLIAAMLATPSPDDASRAAFTPAQILDFYKQNGPHIFNLSRPGNGPKFDGEFLHNITRELLKDTRLSQTLTNVVIPTFDLKRQKPVIFSKYKLENVPYLNALLSDICISTSAIPTQLPPYYFQNDGVEFNLIDGAVAAQNPTHVTVSEVLQHAEYPKILVLSLGTGHTKYVESNSFDARVAAFWTEDIWAAIATDMQGRASSAMAKYYPASLFSRFPPSMSTYLRIDEYDLNPDFSNSVNVTQENLEGLEKTGKQLLQEKVVKMNLDTFNIEEGVETNAEALDRIADILHGERQRRLGSKSMRKGGRPFLETLAQANWAFQKNIHI 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01736 407 Pfam Patatin-like phospholipase 36 225 IPR002641 GO:0006629
Vimu9g01736 407 PANTHER XYLOSE ISOMERASE 21 377 - -
Vimu9g01736 407 Coils Coil 320 340 - -
Vimu9g01736 407 SUPERFAMILY FabD/lysophospholipase-like 33 349 IPR016035 -
Vimu9g01736 407 Gene3D Cytosolic phospholipase A2 catalytic domain 21 383 - -
Vimu9g01736 407 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 36 227 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01736 Vimu-Chr9 26589205 26592817 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01736 24 377 Miscellaneous Gene Families AT2G26560 40.513 1.21e-78 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01736 - - vun:114165690 627.476