Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01733 ATGGCTCATTTGGTTTTCTTTGTTTTGCTCTTTGTTGGGCAACTGATTGGTGGATTCAGTATCCAAAAACTGACTCCATCTGACAGTGGAAATGTATTAACTGTTCTGAGTATTGATGGTGGTGGTATCAGGGGAATTCTTCCAGCAACAGTTCTTGATTACTTAGACAAGGCTCTTAAGGCTAAGGATCCAAATGCAGATTTAGCACATTACTTTGATGTGATAGGAGGAAGTAGCACTGGTGGACTCATAACAGCTATGTTAGCCACCCCAAGTCCTCATGATCCCACTCGTGCTGCCTTTACTCCTGCACAAATTGTTGAATTCTACAAACAATTTGTAAAAGTCAACAATCAATCTACCAGACCTGGAAATGGTTCCCAATTCGATGGAGAGTTTTTACATAACATAACTCGTGAACTGTTGAAGGAAACACGACTTAATCAAACATTGACCAATGTTGTCATCCCAACTTTCGACATGAAGACACAAAAGCCGGTTATATTCTCAAACTATAAGCTTGAGAATGCTCCGTACTTAAATGCGTTGTTGTCGGATATATGCATATCGACTTCAGCTGCACCGACTCAGCTACCACCTTACTATTTTGTGAACGATGGTGTTGAGTTCAATATGGTTGATGGTGGTTTTGCAGCTGGGAATCCGACACAAGCAACAATAAGTGAAGTGCTACAACACAATGAATATCCGAAATTCTTGGTGTTGTATGTGGGAACTGGAACAGAAAAAATTAAGGAGACCTTTGATGCTCAGACGGCTGCCAATTGGTTAGGTCCTGTGATTGGTAAAGCATTGACTGAATACTACTTTGAATCACTCTTCGTAGGCTCCCAACCTGGCGATATATACCTTCGAATTGAGGAATACGACTTGAATCCTGCTTTCTCCAACCAAGTTAATGCCTCACAAGAAAGCATGAAAGGCCTTGAAGAGACCGGAAAACAATTGTTACAAGAAAATGTTTTACAGTTGAATTTGGATACTTTTGATGTTGAAAAACTTGAGCTGAAAAATGCTGAGGCTCTTGACAGGATTGCTGATATTTTGCTTGGGGAGAGACAAAGTCGTCTGAAACGGAAATCTATCGAAAAGAGAGGAAGACCACTTCTTGAAACTCTTAGGGTTTTTTCTGACAAAACTCAAGCAACTTCTCTCAGCCGCGAAACTCTGCCAGCAAAGGATAAGCTCAAATATGAAACTTGGTCAATAGAGGACAAGCTCGGTTACAAAGCTCGCTTCCAAAGACACCAAAGACAAGCCCTTTCAAATCCGTGCTGCGGATCTACTGGATCTGCGAAGGTGCTGCTGGATCTTCACGATTTCTGGGTTTTGTTGCAGGTGATGAAGATGAATGTGCGAGATGATGGAGTTGATTTCACAGCGGCCATGGAGGTTTATGGTTTATGTTCTTATGCAGGTGTGTTCATGGCGAAGAAGATGAATGGTGGCGCGTTCTGCTTGTGCCGCTATGCAGATTTCTCTGATCAAGATGCGATGTAG 1521 0.4201 MAHLVFFVLLFVGQLIGGFSIQKLTPSDSGNVLTVLSIDGGGIRGILPATVLDYLDKALKAKDPNADLAHYFDVIGGSSTGGLITAMLATPSPHDPTRAAFTPAQIVEFYKQFVKVNNQSTRPGNGSQFDGEFLHNITRELLKETRLNQTLTNVVIPTFDMKTQKPVIFSNYKLENAPYLNALLSDICISTSAAPTQLPPYYFVNDGVEFNMVDGGFAAGNPTQATISEVLQHNEYPKFLVLYVGTGTEKIKETFDAQTAANWLGPVIGKALTEYYFESLFVGSQPGDIYLRIEEYDLNPAFSNQVNASQESMKGLEETGKQLLQENVLQLNLDTFDVEKLELKNAEALDRIADILLGERQSRLKRKSIEKRGRPLLETLRVFSDKTQATSLSRETLPAKDKLKYETWSIEDKLGYKARFQRHQRQALSNPCCGSTGSAKVLLDLHDFWVLLQVMKMNVRDDGVDFTAAMEVYGLCSYAGVFMAKKMNGGAFCLCRYADFSDQDAM 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01733 506 PANTHER XYLOSE ISOMERASE 21 364 - -
Vimu9g01733 506 SUPERFAMILY FabD/lysophospholipase-like 32 335 IPR016035 -
Vimu9g01733 506 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 36 227 IPR002641 GO:0006629
Vimu9g01733 506 Gene3D Cytosolic phospholipase A2 catalytic domain 22 369 - -
Vimu9g01733 506 Pfam Patatin-like phospholipase 36 225 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01733 Vimu-Chr9 26505581 26515552 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01733 24 363 Miscellaneous Gene Families AT2G26560 38.760 6.40e-72 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01733 - - vun:114165690 553.518