Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01732 ATGGCTCATTTGGTTTTCTTTGTTTTGCTCTTTGTTGGGCAACTGATTGGTGGATTCAGTATCCAAAAACTGACTCCATCTGACAGTGGAAATGTATTAACTGTTCTGAGTATTGATGGTGGTGGTATCAGGGGAATTCTTCCAGCAACAGTTCTTGATTACTTAGACAAGGCTCTTAAGGCTAAGGATCCAAATGCAGATTTAGCACATTACTTTGATGTGATAGGAGGAAGTAGCACTGGTGGACTCATAACAGCTATGTTAGCCACCCCAAGTCCTCATGATCCCACTCGTGCTGCCTTTACTCCTGCACAAATTGTTGAATTCTACAAACAAAATGGCCCTCATATATTCAATCAATCTACCGGAACTCTATTCGGTCCCCAATTCGATGGAAAGTTTTTACATAACATAATTCGTGAAGTGGTGAAGGATACACGACTTAGTCAAACATTGACCAATGTTGTCATCCCAACTTTCGACATCAAGACACAAAAACCGGTTATATTCTCAAACTATAAGCTTGAGAATGCTCCGTACTTAAATGCGTTGTTATCGGATATATGCATATCGACTTCAGCCGCACCGACTTTTCTACCACCTTACTATTTTGAGAATGATGGTGTTGAGTTCAATATGATTGATGGTGGTGTAGCAGCTGGGAATCCGACACAAGCAATAATAAGTGAAGTGCTACAACACAATGTATATCCGAAATTCTTGGTGTTGTCTTTGGGAACTGGAACAGAAAAAAATAATCAGACCTTGGATGCTGAGAGGGCTGCCAAGTGGTCAGCCTTGCATTGGTTAGGTCCTATTATTGGTTTCTTTAATCGTGTTCCTGCAACCATGACTGAATACTACCTTGAATCACTCTTCTCCCAACCTGGCGATACATACCTTCGAATTGAGGAATACGACTTGAATCCTGCTTTCTCCAATCTAGTTAATGTTACACCAGAAAGCATGAAAGGCCTTGAAGACACCGGAAAACAATTGTTACATGAAAATGTTGTAAAGTTGAATTTGGATACTTTTGATCTTTATAAACTTCAGCAGAAAAATTCTGAGGCTCTTGACAGGATTGCATATATTTTGGTTGAAGAGAGACAACGTCGTCTGAAACGGAAATCTATCGAAAAGAGAGGAAGACCATTTCTTGAATCTCTAAGGGTTTTTCCTGACAAAACTCAAGCAAGTGCGGCACTCCTAAGGAACCCTTTTATTTAA 1230 0.4 MAHLVFFVLLFVGQLIGGFSIQKLTPSDSGNVLTVLSIDGGGIRGILPATVLDYLDKALKAKDPNADLAHYFDVIGGSSTGGLITAMLATPSPHDPTRAAFTPAQIVEFYKQNGPHIFNQSTGTLFGPQFDGKFLHNIIREVVKDTRLSQTLTNVVIPTFDIKTQKPVIFSNYKLENAPYLNALLSDICISTSAAPTFLPPYYFENDGVEFNMIDGGVAAGNPTQAIISEVLQHNVYPKFLVLSLGTGTEKNNQTLDAERAAKWSALHWLGPIIGFFNRVPATMTEYYLESLFSQPGDTYLRIEEYDLNPAFSNLVNVTPESMKGLEDTGKQLLHENVVKLNLDTFDLYKLQQKNSEALDRIAYILVEERQRRLKRKSIEKRGRPFLESLRVFPDKTQASAALLRNPFI 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01732 409 Gene3D Cytosolic phospholipase A2 catalytic domain 22 379 - -
Vimu9g01732 409 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 36 228 IPR002641 GO:0006629
Vimu9g01732 409 PANTHER XYLOSE ISOMERASE 21 374 - -
Vimu9g01732 409 Pfam Patatin-like phospholipase 36 226 IPR002641 GO:0006629
Vimu9g01732 409 SUPERFAMILY FabD/lysophospholipase-like 32 345 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01732 Vimu-Chr9 26485166 26486947 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01732 24 373 Miscellaneous Gene Families AT2G26560 41.344 4.15e-88 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01732 - - vun:114165690 568.926