Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01731 ATGGCTCATTTGGTTTTCTTTGTCTTGCTGTTTGCTGGGCAACTGATTGGTGGATTCAGTATCCAAAAACTGACTCCATCTGACAATGGAAACGTATTAACTGTTCTGAGTATTGATGGTGGTGGTATCAGAGGGATTATTCCTGCAACAGTTCTTGATTACCTAGATAAGGCTCTTAAGGCTAAGGATCCAAATGCAGATTTAGCAAATTATTTTGATGTGATAGGAGGGACTGGCACTGGTGGACTCATAACAGCTTTGTTAGCCACCCCAAGCCTTGATGATCCTACTCGTCCTGCCTTTACTCCTGCACAAATTGTAGACTTCTACAAAGAAAATGGCCCTCGTGTATTGAATGCATCTAGACCTGGAAACGGTCCCCAATTCGATGGAGAGTTTTTACATAACATAACTCGTGAACTGTTTAAGGATACACGACTTAGTCAAACATTGACCAATGTTGTCATCCCAACTTTCGATATGAAGAGACAAAAGCCAGTTATATTCTCAAACTACAAGCTTGGAAGGTATCCCTACTTCAATGCCTTGATGTCTGATATAAGCATATCGGCTGCTGCAGCACCCAATGTTCTACCACCCTACTATTTTGAGAATGATGGTGTTGAGTTCAATTTGATTAACGGTGCCGACTTGAGTTTCATTAGTGATGAGTTAGTGAATGGGAATCCGACTAGAAATACCGTGAGTGAAGCACTACGACACAATAAGTATTCCAGAATACTTGTATTGTCTTTGGGAACTGGAACACCAGAATTTGACGAGATTTGGGATGCTGAAATGGCTGCTACATGGGGAGATTTGGAATGGTTTATTGCTGGGATCATTTTTCTTGATCGTGCAACTACCTCCATGGCAGAGTACTATCATGGTTCACTCTTCCAACAACCTGTCATTACCTACCTTCGAATTCAGGAATACGAATTGGATCCTGCTTACTCCAGCATGATTAATGTTGAAAAAGGAAACATGGAGGGTCTTGAAGAGACTGGGAAAGAACTTTTAGAAGAAAAAGTTAAGAAGATCAATTTGGACACTTTCTCCGTAGAAGAAGGCGTGGGAACAAATGCTGAGGCTCTCGACAGGCTTGCTGATATTTTGTATGGAGAAAGACAGAATCGTCTGAAGCAAAAATCTATAGAAAATGGAGCAAGACCTTTTCTTCAAACTCTTAGGGTTCCTTCAGACAAAACTAAAGCAAATTGGGCATTTCAAAAGAAAAAAGTTATGTGA 1251 0.4069 MAHLVFFVLLFAGQLIGGFSIQKLTPSDNGNVLTVLSIDGGGIRGIIPATVLDYLDKALKAKDPNADLANYFDVIGGTGTGGLITALLATPSLDDPTRPAFTPAQIVDFYKENGPRVLNASRPGNGPQFDGEFLHNITRELFKDTRLSQTLTNVVIPTFDMKRQKPVIFSNYKLGRYPYFNALMSDISISAAAAPNVLPPYYFENDGVEFNLINGADLSFISDELVNGNPTRNTVSEALRHNKYSRILVLSLGTGTPEFDEIWDAEMAATWGDLEWFIAGIIFLDRATTSMAEYYHGSLFQQPVITYLRIQEYELDPAYSSMINVEKGNMEGLEETGKELLEEKVKKINLDTFSVEEGVGTNAEALDRLADILYGERQNRLKQKSIENGARPFLQTLRVPSDKTKANWAFQKKKVM 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01731 416 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 36 240 IPR002641 GO:0006629
Vimu9g01731 416 SUPERFAMILY FabD/lysophospholipase-like 32 352 IPR016035 -
Vimu9g01731 416 Gene3D Cytosolic phospholipase A2 catalytic domain 21 386 - -
Vimu9g01731 416 PANTHER XYLOSE ISOMERASE 21 381 - -
Vimu9g01731 416 Pfam Patatin-like phospholipase 36 211 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01731 Vimu-Chr9 26475817 26477596 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01731 24 380 Miscellaneous Gene Families AT2G26560 39.231 2.33e-76 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01731 - - vun:114165690 524.628