Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01715 ATGGCCACTGCCAATCCCTTTGATTTATTGGGCGACGATGCGGAGGACCCGTCGCAGTTGATCGCGGCCGAGCAGTTGAAGGCCGCCGCGGCCCCGAAGAAAGAGCAGGGCAAGGCTGGACCCCGCGCTGGTGCGGTGGCTCAGCAGAGCAAACCGGCTCAGTTGCCTTCCAAGCCAGTTCCTCCCACTCAGGCTGTGAGGGAGGCAAAAAATGAAACCTCTTATGGTGGCCGTGGAGGTGGCCGAGGAGGTGGACGAGGATATGGACGTGGGCGGGGTGGTGGCAGTGGCTTTGGTCGTGATTTTTCCAATGACGAAAACTCATCTGCCCCTGCTAACCAAGGATCTTTTGAAGGGGAGGCTGGGAATCCCTCAGAAAGGCGTGGTTATGGTGCACCACGTGGTCCTTATCGTGGCAGTGGTCGTGGTCGTCGTGGAGGTTTTAGCAATGGTGAAGTTGGTGATGATGGACGCCCAAGAAGAGCCTTTGAACGCCACAGTGGGACTGGACGAGGAAGTGAATTCAAACGGGATGGCGCTGGACGTGGAAACTGGGGTACCCAATCTGATGAAATTGCTCAGGTCACTGAGGAAGTGGCGGATGAAACGGAAAAGAATTTTGGTGATGAGAAGCCTGTAGGTGTGGAAGATGCTGCAGATGGAAACAAGGACAGTCCTGCTAATGAAAATGAAGAGAAGGAACCAGAGGACAAGGAGATGACCCTGGAAGAGTACGAGAAAGTGCTGGAAGAGAGAAGGAAGGCCCTGCAGGCGCTCAAGACTGAAACAAGAAAGGTGGATATCAAGGAGTTTGCATCCATGCAGCCACTGTCAAACAAGAAAGACAATGATGAGATATTTATTAAATTGGGATCTGAAAAGGATAAGCGTAAAGATGCTTTGGAGAAGGAGGAGAGATCCAAGAAGTCTGTGAACATCAATGAGTTTCTGAAGCCAGCTGAAGGGGAAAGGTACTACAACACAAGTGGTCGTGGAAGAGGACGTGGTCGTGGTGCTCGAGGAGGATACAGTGGAAATGCAGGGAGCAATGTTGCAGCTCCATCAATTGAGGATCCTGGCCAATTCCCAACTTTGGGTGGCAAGTGA 1107 0.5239 MATANPFDLLGDDAEDPSQLIAAEQLKAAAAPKKEQGKAGPRAGAVAQQSKPAQLPSKPVPPTQAVREAKNETSYGGRGGGRGGGRGYGRGRGGGSGFGRDFSNDENSSAPANQGSFEGEAGNPSERRGYGAPRGPYRGSGRGRRGGFSNGEVGDDGRPRRAFERHSGTGRGSEFKRDGAGRGNWGTQSDEIAQVTEEVADETEKNFGDEKPVGVEDAADGNKDSPANENEEKEPEDKEMTLEEYEKVLEERRKALQALKTETRKVDIKEFASMQPLSNKKDNDEIFIKLGSEKDKRKDALEKEERSKKSVNINEFLKPAEGERYYNTSGRGRGRGRGARGGYSGNAGSNVAAPSIEDPGQFPTLGGK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01715 368 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 367 IPR039764 GO:0003723
Vimu9g01715 368 Pfam Stm1 1 80 IPR019084 -
Vimu9g01715 368 MobiDBLite consensus disorder prediction 318 368 - -
Vimu9g01715 368 SMART HABP4_PAI_RBP1_2 159 267 IPR006861 -
Vimu9g01715 368 MobiDBLite consensus disorder prediction 25 242 - -
Vimu9g01715 368 MobiDBLite consensus disorder prediction 101 120 - -
Vimu9g01715 368 MobiDBLite consensus disorder prediction 292 311 - -
Vimu9g01715 368 MobiDBLite consensus disorder prediction 149 178 - -
Vimu9g01715 368 MobiDBLite consensus disorder prediction 198 242 - -
Vimu9g01715 368 Coils Coil 242 265 - -
Vimu9g01715 368 Gene3D - 157 270 - -
Vimu9g01715 368 Pfam Hyaluronan / mRNA binding family 159 266 IPR006861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01715 Vimu-Chr9 26286171 26289305 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01715 K13199 - gmx:100791259 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g01715 9 26286171 26289305 Vimu9g01715 9 26286171 26289305 ECH