Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01714 AAAAGCTTACACTTGATAAACCCTATCTTATCCCCCATTTGTGGAAGAACCACCCGTGTTCGCGCCATGGGAATCCTCGCTTTGCCCTTAGTCATTTCCCTTCTCAAACCCAACGCCACCACTCGCCTCCGCCTCTCCCACTCACTCCTCCGCCGCCGCCGCCACTTCGCCACCACCGTCTCCGCCACCACCACTCCTCATTCTCCTTCTTCACCGTCACCTTCACCTTCACCTTCTCTCTCACGCCACTCTTCTGCTTCAACTCACTCTGACAATCGTTCCGTTAACTCCCGAAGCCTTACCTTCCAACAAGCCATTCAGCGCCTTCAGGAATACTGGGCCTCTGTTGGATGTTCCATAATGCAATGTAGCAACACAGAGGTTGGAGCTGGGACTATGAATCCTCTTACATATTTAAGGGTTCTTGGCCCTGAACCATGGAATGTCGCGTATGTGGAACCTAGCATCCGCCCTGATGATAGTCGATATGGAGAAAACCCGAATAGGCTCCAAAGACATACTCAATTTCAGGTGATATTGAAGCCTGATCCTGGAAATTCTCAGGATCTATTTATCCGCAGCCTCTCTGCTTTAGGTATTGATGTTACTGCACATGATATACGATTTGTGGAAGATAACTGGGAGAGTCCGGTTCTTGGTGCTTGGGGTTTGGGCTGGGAAATTTGGATGGATGGTATGGAGATTACGCAATTCACCTACTTTCAGCAGGCAGGAAGTCTGCAGTTATCACCTGTATCTGTGGAAATTACTTATGGCCTTGAGCGTATCCTTATGTTACTGCAAGGTGTTGATCACTTCAAGAAGATAAAGTATTCGGATGGAATTACATATGGAGAGTTGTTCTTGGAGAATGAGAAGGAAATGAGTGCATACTACTTGGAGCATGCTAGTGTTGATCACGTTCAAAAACATTTTGATTTCTTTGAGGAGGAAGCTCGTAGCTTACTTTCTTCTGGCTTTGCAATCCCTGCGTATGATCAGCTTCTGAAAACATCTCATGCTTTTAATATCCTAGACTCCAGAGGCTTTGTTGGAGTAACAGAGCGTGCTCGCTATTTTGGTCGCATGCGTAGGAAATCTGTAACATTAACCATTCCCTCCTATTATCTCAACTCCCCTTCATCTTTCTTGCTATCTGTTACATCAACTGTGACCCATTCTGTTACTGAGAGGAGCAGATCCTATGCACTCCTTCCTAATATTAAACTCGGCTTCCTGATGGATTCATCCTACTCTTGCACAGATTCTGTACATTTTATGTTTTTTTCCTTCATCTTGGTTTTCTCTAGTTTGGCTCGCCAATGTGCTCAACTTTGGTTGAAGACAAGGGAGATGCTTGGCTTTCCCCTTGGTTTTATCTCTGAACCTGATCATTTTGTGTTGCCAAAAGGAGTTTTGGAAGCTGCATGTGGGAAGGTCCATGATCATTCAAGAGTATTTGTTCTTGAAATTGGGACTGAAGAGATGCCGCCTCAAGATGTTGTTGATGCTAGTAATCAACTGAAATATTTAATGCTGCAACTGCTTGAGCGGCAAAGGTTAAACCATGGTGAAGTGCAAGCATTTGGAACTCCACGTAGATTAGTGGTTGTTGTTGAAAATCTTTACACAAAACAGGCTGAAAAGGAGGTTGAAGTTCGAGGCCCTCCTGTTTCAAAAGCATTTGATCATGAGGGAAATCCAACAAAGGCCATTGAGGGTTTTTCTCGTAGATACTCTGTACCACTGGACCTAGTATTCAGAAAAGTCGATGGGAAAACAGAATATGTTTATGCACGTGTAAAGGAGTCTTCAAGATATGCTTTGGAGGAAAATGCTATAGCTGCTGATTTCTTCTACTTTTATCAGGTCTTGTCTGAAGATTTGCCTGCTACTATTGCTAAAATTTCATTTCCAAAGACAATGCGTTGGAACTCTCAGGTGATGTTTAGCAGGCCTATCCGTTGGATTTTAGCTCTGCATGGAGATGTAGTAGTCCCATTTACGTTTGCTGGGGTGACAAGTGGAAACATGTCTTGCGGTCTTCGTAATACTTCTTCAGCTGTTGTCCAGGTGGAAAATGCAGAATCTTATTCAGTTGCAATTAACAATGCAGGAATCAAAGTTTCAGTTGAGGACCGTAAGAAAATTATTTTTGAACAGTCTAATGCATTAGCAAAAGGTGTAAATGGCCAAATTCTTATTCCAAAAGGTTTGCTTGACGAGGTTGTAAATCTTGTTGAGGCTCCTTTTCCCGTGCTTGGAAAGTTTAAAGAAACCTTCTTAGATCTTCCAAAAGATCTTTTAACAATGGTTATGCAAAAGCATCAAAAGTATTTTGCTGTATGTGATGGGAATGGACAATTATTGCCTTATTTCGTTGCTGTTGCAAATGGAGCAATTGATGAGACTACTGTGAGGAAAGGAAATGAAGCTGTGCTCAGGGCTCGCTATGAAGATGCGAAGTTCTTTTATGAGATGGACACTCGTAAGAGGTTTACAGAGTTCCGAAAACAACTGAAAAACATTCTATTTCATGAGAAGCTTGGGACTATGCTTGATAAGATGACTCGTGTTGAAAACATGGTTGCTGAACTAAGTTGCATCCTAGATATGAGTGAAGATGTGCAAGATATTATCCGTGATGCTGCCTCTCTTGCAATGTCTGATCTTTCCACTGCAGTTGTCACTGAATTTACCTCACTTGCGGGAATTATGGGCCGCCACTATGCCCTTAGGGATGGATACTCAGAGCAGGTTGCAGAAGCCTTGTTTGAGATCACGCTTCCTAGATTTTCTGGGGACACGCTTCCTGAAAGTGATGCTGGCATAGTTTTAGCAATTGCTGATAGATTAGATAGCCTGGTAGGTTTATTTTCTGCTGGTTGTCAACCTAGTTCCACAAATGATCCATTTGGTCTGCGAAGAATTTCATATGGTCTTGTGCAACTATTGGTGGAAAAGAATAAAAATCTAGATTTTAAAAAGGCCCTGGAACTCGCTGCAGAAGTCCAGCCCATTAAAGTAGATCCTCATGTAATCGATGAAGTACTTCACTTTGTTACACGAAGATTGGAGCAATTTCTGGTAGCAAAATCAGCATATAAAATGGAAAAATTGTCAAGAGGGGACCTTTTTCCTAAAGTTGTTGAAGCATACTCCAGGCCAACTAGAATTGTCCGTGGGAAGGAAGTTGAACTTCATGAGGAGGTGGATGAGGCTGCTTTTGTTACAAATGAAGAGAGAGTTTTATGGAACACGTTTTTGTCTGTTAAAAAGAGTATCCATCCTGGTCTTGACATAGATGATTTTGTAGAAACTTCATGTCAGTTGATACAGCCACTTGAGGATTTCTTCAATAATGTCTTTGTAATGGTGGACGATGAGAAGATCAGAGTAAACAGGTTAACTTTGCTAAAAGGAATTGCTGATCTTCCTAAAGGAATAGCAGACCTCACTGTTCTACCTGGATTTTAA 3477 0.4231 KSLHLINPILSPICGRTTRVRAMGILALPLVISLLKPNATTRLRLSHSLLRRRRHFATTVSATTTPHSPSSPSPSPSPSLSRHSSASTHSDNRSVNSRSLTFQQAIQRLQEYWASVGCSIMQCSNTEVGAGTMNPLTYLRVLGPEPWNVAYVEPSIRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQDLFIRSLSALGIDVTAHDIRFVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLQLSPVSVEITYGLERILMLLQGVDHFKKIKYSDGITYGELFLENEKEMSAYYLEHASVDHVQKHFDFFEEEARSLLSSGFAIPAYDQLLKTSHAFNILDSRGFVGVTERARYFGRMRRKSVTLTIPSYYLNSPSSFLLSVTSTVTHSVTERSRSYALLPNIKLGFLMDSSYSCTDSVHFMFFSFILVFSSLARQCAQLWLKTREMLGFPLGFISEPDHFVLPKGVLEAACGKVHDHSRVFVLEIGTEEMPPQDVVDASNQLKYLMLQLLERQRLNHGEVQAFGTPRRLVVVVENLYTKQAEKEVEVRGPPVSKAFDHEGNPTKAIEGFSRRYSVPLDLVFRKVDGKTEYVYARVKESSRYALEENAIAADFFYFYQVLSEDLPATIAKISFPKTMRWNSQVMFSRPIRWILALHGDVVVPFTFAGVTSGNMSCGLRNTSSAVVQVENAESYSVAINNAGIKVSVEDRKKIIFEQSNALAKGVNGQILIPKGLLDEVVNLVEAPFPVLGKFKETFLDLPKDLLTMVMQKHQKYFAVCDGNGQLLPYFVAVANGAIDETTVRKGNEAVLRARYEDAKFFYEMDTRKRFTEFRKQLKNILFHEKLGTMLDKMTRVENMVAELSCILDMSEDVQDIIRDAASLAMSDLSTAVVTEFTSLAGIMGRHYALRDGYSEQVAEALFEITLPRFSGDTLPESDAGIVLAIADRLDSLVGLFSAGCQPSSTNDPFGLRRISYGLVQLLVEKNKNLDFKKALELAAEVQPIKVDPHVIDEVLHFVTRRLEQFLVAKSAYKMEKLSRGDLFPKVVEAYSRPTRIVRGKEVELHEEVDEAAFVTNEERVLWNTFLSVKKSIHPGLDIDDFVETSCQLIQPLEDFFNNVFVMVDDEKIRVNRLTLLKGIADLPKGIADLTVLPGF 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01714 1158 MobiDBLite consensus disorder prediction 58 97 - -
Vimu9g01714 1158 PANTHER GLYCYL-TRNA SYNTHETASE 99 366 IPR006194 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vimu9g01714 1158 Pfam Glycyl-tRNA synthetase beta subunit 487 1032 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vimu9g01714 1158 SUPERFAMILY Class II aaRS and biotin synthetases 101 365 IPR045864 -
Vimu9g01714 1158 Hamap Glycine--tRNA ligase beta subunit [glyS]. 484 1155 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vimu9g01714 1158 ProSiteProfiles Heterodimeric glycyl-transfer RNA synthetases family profile. 101 364 IPR006194 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vimu9g01714 1158 NCBIfam glycine--tRNA ligase subunit alpha 101 366 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vimu9g01714 1158 NCBIfam glycine--tRNA ligase subunit beta 487 1032 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vimu9g01714 1158 SUPERFAMILY HD-domain/PDEase-like 828 959 - -
Vimu9g01714 1158 Gene3D Bira Bifunctional Protein; Domain 2 86 303 IPR045864 -
Vimu9g01714 1158 FunFam Glycine--tRNA ligase alpha subunit 94 303 - -
Vimu9g01714 1158 MobiDBLite consensus disorder prediction 77 97 - -
Vimu9g01714 1158 ProSiteProfiles Heterodimeric glycyl-transfer RNA synthetases family profile. 851 1029 IPR006194 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vimu9g01714 1158 PRINTS Glycyl-tRNA synthetase alpha subunit signature 154 169 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vimu9g01714 1158 PRINTS Glycyl-tRNA synthetase alpha subunit signature 255 270 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vimu9g01714 1158 PRINTS Glycyl-tRNA synthetase alpha subunit signature 175 195 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vimu9g01714 1158 PRINTS Glycyl-tRNA synthetase alpha subunit signature 232 252 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vimu9g01714 1158 PRINTS Glycyl-tRNA synthetase alpha subunit signature 340 356 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vimu9g01714 1158 PRINTS Glycyl-tRNA synthetase alpha subunit signature 206 230 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vimu9g01714 1158 Pfam Glycyl-tRNA synthetase alpha subunit 102 368 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Vimu9g01714 1158 Gene3D Class II aaRS and biotin synthetases; domain 2 304 381 - -
Vimu9g01714 1158 Hamap Glycine--tRNA ligase alpha subunit [glyQ]. 100 380 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01714 K14164 - thj:104816999 1455.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g01714 9 26241159 26279774 Vimu9g01714 9 26241159 26279774 ECH