Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01696 ATGCTCTGCTGGACGAAATTCGTTTGGGGTGATTTAGGGAGAGAAACCCCAATTTTCGAGCTTTTCGTCGAGCTTCTTACCGATGGTCGTGGATCCTTCGCACCTTTGGCTTGTTACAGATCAACAGATATGAGTGAAGAGTCTGACTCTAAAGTCGAGGCTATGGATCTCTTATGCCAGTTGGAGGATATCCTTGAATCTGATGCTCTAATTGACGAGCTGGGCTTTATTCATCCCTCGCAATTCCCTTTGCTAAAGGAAGAATCGGACATTTCATGTAATTTATCTTATGAAGTTATCCATCAATCAGAAGATGGAGTAGTAAGCCCTGTGGAACCTTCCAAACAAGACAACATATATTTCTGGAACAGAGATCATAAACTGGGAATTTCAACTCATGTTCTTCTACCGTTATATAGAGCAGCTAAACATGCATTTTTTATTACATTTAAACAATACAGAATGTGTGACAACCAATCTGGTAAAGTTGGAATTTGCTTACCTGCTTCTTCTTGTGATCATCTTGAAAGTACCCTTCTGAGACATAGCAAGTCTCTTCTGTTGCTAAGCTGTGATTTTATGACAGCTTGGAATTGCAGAAAGTTAATAGTGTCCAAGAAGCAACAGCTCTCAATGTTTCTAGATGAACTTCTGCTGTCAGGACTTGTACTCTCTTATTCACCCAAAAGCGAACAAGCTTGGACTCATAGGCGATGGGTGATCAAGTCAATCTCCGCAAACTGTTCAAATTTCAAAGATATATTGGGAAAAGAATCCGAGTTGGTGGAAAAAATAGCCGAGAGATCAAAAATGAATTATCGTGCATGGAATCACCGTTGCTGGTTAGTCTCATACATGACCACTGACCAGGTTCTGTGTGAGTTAAGGAAATCAAGAAGTTGGGCTGCACTGCATGTCGCTGATAATTGTTGTTTCCATTATCGTAGACGACTATTACTGAGAATTATGGAGAGTCAAAGTTGTCTGGAAGATACTGTATCTTGTGGTCATAATGTTAATATAGTCCAAACCTTGAAGGACGAGCTTGATTGGAATGAAACACTGATAAAACGTTATGTTGGAAGAGAGGCTCTATGGCTTCATCGGCGCTTCCTTTCCACGTGCTGGATAAATCATTTTGTACCTGATTCTGGGGATGAGTCCTACCATTCCAAGGAGGCAATAGGCCTGTATCATGACTTTGGCACCTTTCTGCAGAATGAATTGTGTCTTCTCCACTCGTGCTCAACTTTTGTTGATGATGATTTTGTGGATGTCCAAGCACAAGCTGCACATTCTGCTTGTTATATTCTGTGGTTGAAAGTGCAAGTCCCCAAGTCTCTGGTGAATCAGCTCCAAGAGAAGATAAGAGATGCTGATCTGAAGACCTTGCTGAATAAGTCATGCCCAGAGAGATCCTCACTGTTCAATTACTTCATGAACTAG 1446 0.4115 MLCWTKFVWGDLGRETPIFELFVELLTDGRGSFAPLACYRSTDMSEESDSKVEAMDLLCQLEDILESDALIDELGFIHPSQFPLLKEESDISCNLSYEVIHQSEDGVVSPVEPSKQDNIYFWNRDHKLGISTHVLLPLYRAAKHAFFITFKQYRMCDNQSGKVGICLPASSCDHLESTLLRHSKSLLLLSCDFMTAWNCRKLIVSKKQQLSMFLDELLLSGLVLSYSPKSEQAWTHRRWVIKSISANCSNFKDILGKESELVEKIAERSKMNYRAWNHRCWLVSYMTTDQVLCELRKSRSWAALHVADNCCFHYRRRLLLRIMESQSCLEDTVSCGHNVNIVQTLKDELDWNETLIKRYVGREALWLHRRFLSTCWINHFVPDSGDESYHSKEAIGLYHDFGTFLQNELCLLHSCSTFVDDDFVDVQAQAAHSACYILWLKVQVPKSLVNQLQEKIRDADLKTLLNKSCPERSSLFNYFMN 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01696 481 Gene3D Protein prenylyltransferase 154 416 - -
Vimu9g01696 481 Pfam Protein prenyltransferase alpha subunit repeat 258 286 IPR002088 GO:0008318|GO:0018342
Vimu9g01696 481 Pfam Protein prenyltransferase alpha subunit repeat 345 372 IPR002088 GO:0008318|GO:0018342
Vimu9g01696 481 Pfam Protein prenyltransferase alpha subunit repeat 215 242 IPR002088 GO:0008318|GO:0018342
Vimu9g01696 481 SUPERFAMILY Protein prenylyltransferase 125 379 - -
Vimu9g01696 481 FunFam Protein prenyltransferase alpha subunit repeat-containing protein 1-B isoform D 149 459 - -
Vimu9g01696 481 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 254 288 IPR002088 GO:0008318|GO:0018342
Vimu9g01696 481 PANTHER PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT 72 478 - -
Vimu9g01696 481 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 212 246 IPR002088 GO:0008318|GO:0018342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01696 K14137 - gmx:100807426 741.495