Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01685 ATGGCTCAAGCAATGGCATCAATGGCAGGTAGCCTTCAACTCAGTGGCTCCACACGTTTGCATGCCAAAAGGGTGTCTTCAGTCACACGTGCAGGCTTCACAGTTAGAGCACAACATCAACAAGAACAAGTGAGTGGTGAGGCTCACAGTAGCCGTAGGACAGTGCTGTCTCTTGTTGCTGCTGTGAACTTCCCTTGCGCTGTACAAGGAACTATATTTTCTCAGAGGAAACAATTATCTGATGGATGCACAAACCAAAATTCAAAGGATTATTACCTAATGCAGGATAGTTCCATGTTGCGTTCTGAAAAATCTTTGAGGAGAACACTCTTCCTTTCTGTCTTGGTCTCAACTGGTTTTTTTCCAACTTTGTATTCTTATGCAAAGACAAAGAGTAAGAATCCTTATGATGAAAAACGATTGCTACAACAAAATCAGCGGATACAGAAGGAAAACAATGCGCCAGAGGACTTCCCAAATTTTATTAGAGAAGGTTTTGAAGTTAAAATAGTATCTTCAGAGAACTATTTAAAGAGTAACTCGGGACTCATATACCGGGATTTTGTAGTTGGTCAAGGTGATTGCCCAAAGGATGGTCAGCAGGTCACTTTTCACTATGTTGGTTATAATGAATCTGGTCGTCGAATTGACAGCACTTACTTGCAGGGTACTCCTGCCAAAATCCGCATGGGTACCAAGGCATTAGTTCCAGGGGAGGAAATAAGTGCAGAAGGAAGTGAGAAAAGTACATTTTCTGATGTAGGATTTGAGGAGGGAATAAGAGACATGAGACCAGGTGGGAAGAGAAGAATCATCATCCCCCCTGAACTTGGACCACCAGTAGGACCTTCAACCTTTTTCAGCTCAAAACAGTTTGAAGTTTTTGATGTGGAGCTATTAAGCGTGCAAAATTGTGAAAGGAGGACCGTAGCCTTTTACTCAGATCTAATTTGCAATTGA 960 0.4208 MAQAMASMAGSLQLSGSTRLHAKRVSSVTRAGFTVRAQHQQEQVSGEAHSSRRTVLSLVAAVNFPCAVQGTIFSQRKQLSDGCTNQNSKDYYLMQDSSMLRSEKSLRRTLFLSVLVSTGFFPTLYSYAKTKSKNPYDEKRLLQQNQRIQKENNAPEDFPNFIREGFEVKIVSSENYLKSNSGLIYRDFVVGQGDCPKDGQQVTFHYVGYNESGRRIDSTYLQGTPAKIRMGTKALVPGEEISAEGSEKSTFSDVGFEEGIRDMRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQNCERRTVAFYSDLICN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01685 319 Gene3D - 141 311 IPR046357 GO:0003755
Vimu9g01685 319 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 199 303 IPR001179 GO:0003755
Vimu9g01685 319 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 42 319 IPR044239 -
Vimu9g01685 319 SUPERFAMILY FKBP-like 129 303 - -
Vimu9g01685 319 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 196 279 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01685 Vimu-Chr9 26009881 26014259 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu9g01685 192 305 Calmodulin-binding Proteins AT5G48570 28.448 9.70e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01685 - - var:108347486 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g01685 9 26009881 26014259 Vimu9g01685 9 26009881 26014259 ECH