Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g01678 ATGGCAGGTGCAGAAGGGTTCGTGGAAGCAGATAATGCAGAGGCCATTATCACCAGAATTGAACACAAATCCCGCAAGATCGAAACTTTACTCAAACAGTATAAACCTGTGGAAGCTCTTAAAACCGCCCTTGAAGGAACATACGCCATCATTGGGGATGAGCGTTGCAAGTCAGCACACTGGCTTGTGGTGCACAGAGCTATAATGGCTATAAAAGATGTGGATGGGATGCTTTCTTCATTGGATCCTGAGTACTATGATATCCTAATGAAGTACTTGTATAGAGGCTTAGCTACCGGAGATCGTCCCACATGCGATCAATGTCTTCGGATTCATGAAAAATTGACAGAGAAAGCAGGACTTGGTTGCATCCTACGTTTCCTGACTGATACTGTAAATACAGTTTGA 408 0.4387 MAGAEGFVEADNAEAIITRIEHKSRKIETLLKQYKPVEALKTALEGTYAIIGDERCKSAHWLVVHRAIMAIKDVDGMLSSLDPEYYDILMKYLYRGLATGDRPTCDQCLRIHEKLTEKAGLGCILRFLTDTVNTV 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g01678 135 SUPERFAMILY Arp2/3 complex 16 kDa subunit ARPC5 8 131 IPR036743 GO:0005885|GO:0015629|GO:0030833|GO:0034314
Vimu9g01678 135 Gene3D - 17 132 IPR036743 GO:0005885|GO:0015629|GO:0030833|GO:0034314
Vimu9g01678 135 FunFam Actin-related protein 2/3 complex subunit 5 16 132 - -
Vimu9g01678 135 PANTHER ARP2/3 COMPLEX 16 KD SUBUNIT P16-ARC 9 134 IPR006789 GO:0005885|GO:0015629|GO:0034314
Vimu9g01678 135 Pfam ARP2/3 complex 16 kDa subunit (p16-Arc) 13 131 IPR006789 GO:0005885|GO:0015629|GO:0034314
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g01678 Vimu-Chr9 25965858 25968971 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g01678 K05754 - gmx:100809745 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g01678 9 25965858 25968971 Vimu9g01678 9 25965858 25968971 ECH